RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ZNF639Q9UID6 485 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 PARP14Q460N5 1801 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 A0A0G2JMP0 313 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 GABRDO14764 452 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 ABRAXAS2Q15018 415 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 BTBD16Q32M84 506 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 UBXN11Q5T124 520 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 IRAK1BP1Q5VVH5 260 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 ADHFE1Q8IWW8 467 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 UBQLNLQ8IYU4 475 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 PGBD5Q8N414 524 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 ATG16L2Q8NAA4 619 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 NETO1Q8TDF5 533 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 DEDD2Q8WXF8 326 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 CDKN2AIPNLQ96HQ2 116 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 EGFL8Q99944 293 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 AARSD1Q9BTE6 412 aaKnown RBP13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 ZNF224Q9NZL3 707 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 KIF17Q9P2E2 1029 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 HCN4Q9Y3Q4 1203 aa13.83□□□□□ -0.19
PCDHB3-201ENST00000231130 UPK3BL1B0FP48 263 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 UPK3BL2E5RIL1 263 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 THP07101 528 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 SLC26A3P40879 764 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 BEX3Q00994 111 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 LRRC26Q2I0M4 334 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 Q6ZPB1 254 aaPredicted RBP13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 PHC2Q8IXK0 858 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 KIAA1191Q96A73 305 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 FAM120BQ96EK7 910 aaKnown RBP13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 PGAP3Q96FM1 320 aaPredicted RBP13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 ZBTB18Q99592 522 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 MUC13Q9H3R2 512 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 TFB2MQ9H5Q4 396 aaKnown RBP13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 TRMT6Q9UJA5 497 aaKnown RBP13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 PCTPQ9UKL6 214 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 PCDHGA10Q9Y5H3 936 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 DNMT3AQ9Y6K1 912 aaPredicted RBP13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 MEIOCA2RUB1 952 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 RGS10O43665 173 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 VPS4BO75351 444 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 TP53P04637 393 aaPredicted RBP13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 CYP11A1P05108 521 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 PCMT1P22061 227 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 MASP1P48740 699 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 FAM189BP81408 668 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 UBE3AQ05086 875 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 PIK3R6Q5UE93 754 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 LAIR1Q6GTX8 287 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 CES5AQ6NT32 575 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 BEND5Q7L4P6 421 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 B3GNT8Q7Z7M8 397 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 C10orf111Q8N326 155 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 DPY30Q9C005 99 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 SMPD4Q9NXE4 827 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 FBXL12Q9NXK8 326 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 SBF1O95248 1867 aa13.83□□□□□ -0.2
PCDHB3-201ENST00000231130 MUSKO15146 869 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 FGF10O15520 208 aaPredicted RBP13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 SEC22BO75396 215 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 MMP2P08253 660 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 HK3P52790 923 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 NFKB2Q00653 900 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 STARD3Q14849 445 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 SLC14A2Q15849 920 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 DUSP7Q16829 419 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 DDR2Q16832 855 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 OR4F6Q8NGB9 312 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 SLC13A3Q8WWT9 602 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 PYCR2Q96C36 320 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 TIGARQ9NQ88 270 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 SLC6A13Q9NSD5 602 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 VNN3Q9NY84 501 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 NEU3Q9UQ49 428 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 POLR2AP24928 1970 aaKnown RBP13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 WDR47O94967 919 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 KCNE1P15382 129 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 PCSK1P29120 753 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 AKT1P31749 480 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 HSPA7P48741 367 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 NUDT6P53370 316 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 RAB41Q5JT25 222 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 PNCKQ6P2M8 343 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 CYP4Z1Q86W10 505 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 ST13P5Q8NFI4 369 aaPredicted RBP13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 OR52E6Q96RD3 313 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 ZNF300Q96RE9 604 aaPredicted RBP13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 MROH8Q9H579 483 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 TMEM39AQ9NV64 488 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 ZNF451Q9Y4E5 1061 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 TANC1Q9C0D5 1861 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 A0A096LPI6 279 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 CTDSP2O14595 271 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 RPP40O75818 363 aaKnown RBP13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 M6PRP20645 277 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 GADD45AP24522 165 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 C21orf33P30042 268 aaPredicted RBP13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 OR1E1P30953 314 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 GPR15P49685 360 aa13.82□□□□□ -0.2
PCDHB3-201ENST00000231130 STC1P52823 247 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms