RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 C7orf26Q96N11 449 aa7.8□□□□□ -1.16
NANOG-201ENST00000229307 TGM7Q96PF1 710 aa7.8□□□□□ -1.16
NANOG-201ENST00000229307 SERINC1Q9NRX5 453 aa7.8□□□□□ -1.16
NANOG-201ENST00000229307 THAP10Q9P2Z0 257 aaPredicted RBP7.8□□□□□ -1.16
NANOG-201ENST00000229307 VPS29Q9UBQ0 182 aa7.8□□□□□ -1.16
NANOG-201ENST00000229307 FBLP22087 321 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 SLC6A4P31645 630 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 CTHP32929 405 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 TAS2R41P59536 307 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 RPS15AP62244 130 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 LGALS3BPQ08380 585 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 EPS8Q12929 822 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 MTAPQ13126 283 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 PWP1Q13610 501 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 FASTKD3Q14CZ7 662 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 EGFLAMQ63HQ2 1017 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 RSPO2Q6UXX9 243 aaPredicted RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 TMIGD1Q6UXZ0 262 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 TBC1D21Q8IYX1 336 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 CPSF7Q8N684 471 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 DENND6BQ8NEG7 585 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 SLC35G5Q96KT7 338 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 LENG8Q96PV6 779 aaPredicted RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 BTBD9Q96Q07 612 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 CDRT15Q96T59 188 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 EPB41L1Q9H4G0 881 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 ZNF282Q9UDV7 671 aaPredicted RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 SLC2A6Q9UGQ3 507 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 COPG1Q9Y678 874 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 HLA-DQA2P01906 255 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 ALOX5P09917 674 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 HOXD9P28356 352 aaPredicted RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 SNTA1Q13424 505 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 METTL21CQ5VZV1 264 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 FRG2Q64ET8 278 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 CCSAPQ6IQ19 270 aaPredicted RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 IYDQ6PHW0 289 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 CRTC1Q6UUV9 634 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 RNF44Q7L0R7 432 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 EIF3MQ7L2H7 374 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 ZC3HC1Q86WB0 502 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 C12orf40Q86WS4 652 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 KIF2BQ8N4N8 673 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 ZNF689Q96CS4 500 aaPredicted RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 PTCD3Q96EY7 689 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 SLC38A2Q96QD8 506 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 FRG2BQ96QU4 278 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 ACTL8Q9H568 366 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 FZD3Q9NPG1 666 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 PRDM8Q9NQV8 689 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 FZD4Q9ULV1 537 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 ATXN2Q99700 1313 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 LDOC1O95751 146 aaPredicted RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 CD72P21854 359 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 GLDCP23378 1020 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 PSME3P61289 254 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.79□□□□□ -1.16
NANOG-201ENST00000229307 FAM109BQ6ICB4 259 aaPredicted RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 PLEKHM3Q6ZWE6 761 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 ZNF765Q7L2R6 523 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 RANBP3LQ86VV4 465 aaPredicted RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 CPNE8Q86YQ8 564 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 PIK3C3Q8NEB9 887 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 KIAA1191Q96A73 305 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 UHRF1Q96T88 793 aaPredicted RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 GPR22Q99680 433 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 GDF15Q99988 308 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 KCNK12Q9HB15 430 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 NECTIN3Q9NQS3 549 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 ZSCAN32Q9NX65 697 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 MAGEL2Q9UJ55 1249 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 SAMD4AQ9UPU9 718 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 TIMM22Q9Y584 194 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 KCTD3Q9Y597 815 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 MYH11P35749 1972 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 PRORSD1PA6NEY8 169 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 STX16-NPEPL1H3BU86 382 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 STX16O14662 325 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 PROS1P07225 676 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 RPSAP08865 295 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 MPSTP25325 297 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 EPHA3P29320 983 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 AFF3P51826 1226 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 UGT2B15P54855 530 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 RPS14P62263 151 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 ARHGAP8P85298 464 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 DCAF12L1Q5VU92 463 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 PARM1Q6UWI2 310 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 ASPGQ86U10 573 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 RAB43Q86YS6 212 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 UTP15Q8TED0 518 aaKnown RBP7.79□□□□□ -1.16
NANOG-201ENST00000229307 XAGE5Q8WWM1 108 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 MUC13Q9H3R2 512 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 IL21RQ9HBE5 538 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 GRHL1Q9NZI5 618 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 SEC14L3Q9UDX4 400 aa7.79□□□□□ -1.16
NANOG-201ENST00000229307 ATP6AP2A0A1C7CYW4 349 aa7.78□□□□□ -1.16
NANOG-201ENST00000229307 ATP6AP2O75787 350 aa7.78□□□□□ -1.16
NANOG-201ENST00000229307 IFNGP01579 166 aa7.78□□□□□ -1.16
NANOG-201ENST00000229307 IGHEP01854 428 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms