RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SPIN3Q5JUX0 258 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 SPERTQ8NA61 448 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 GKN1Q9NS71 199 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 COL20A1Q9P218 1284 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 DNAJA2O60884 412 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 SCGB1D2O95969 90 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 KLK1P06870 262 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 CHRM5P08912 532 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-201ENST00000225964 EDNRAP25101 427 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 GBX2P52951 348 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-201ENST00000225964 SLC10A7Q0GE19 358 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 CLEC12AQ5QGZ9 265 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF776Q68DI1 518 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-201ENST00000225964 GRASPQ7Z6J2 395 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-201ENST00000225964 MREGQ8N565 214 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 OR2L8Q8NGY9 312 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 OR5AK3PQ8NH89 298 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 ALG3Q92685 438 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 PNPLA2Q96AD5 504 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 SLC35A5Q9BS91 424 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 ZDHHC3Q9NYG2 299 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 AK5Q9Y6K8 562 aa12.97□□□□□ -0.33
COL1A1-201ENST00000225964 LRRC10BA6NIK2 292 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 UGT1A9O60656 530 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 B4GALT2O60909 372 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 UGT1A6P19224 532 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 UGT1A1P22309 533 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 UGT1A4P22310 534 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 ARL3P36405 182 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 MTPNP58546 118 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 NUDT13Q86X67 352 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 OR4E2Q8NGC2 313 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 OR13C4Q8NGS5 318 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 LRTOMTQ8WZ04 291 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 GFM1Q96RP9 751 aaKnown RBP12.96□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF347Q96SE7 839 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 CHIAQ9BZP6 476 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 UGT1A7Q9HAW7 530 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 UGT1A10Q9HAW8 530 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 UGT1A8Q9HAW9 530 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 C5orf51A6NDU8 294 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF878C9JN71 531 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 K7EPI3 171 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 ERI3O43414 337 aaKnown RBP12.96□□□□□ -0.33
COL1A1-201ENST00000225964 MMP20O60882 483 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 RPL10P27635 214 aaKnown RBP12.96□□□□□ -0.33
COL1A1-201ENST00000225964 RPS24P62847 133 aaKnown RBP12.96□□□□□ -0.33
COL1A1-201ENST00000225964 PITPNAQ00169 270 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 PDE12Q6L8Q7 609 aaKnown RBP12.96□□□□□ -0.33
COL1A1-201ENST00000225964 NOXRED1Q6NXP6 359 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 PGAM4Q8N0Y7 254 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 SVOPLQ8N434 492 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 NAT14Q8WUY8 206 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 YJEFN3A6XGL0 299 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 SLC5A9Q2M3M2 681 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 CRTC2Q53ET0 693 aaPredicted RBP12.96□□□□□ -0.33
COL1A1-201ENST00000225964 KIAA1161Q6NSJ0 714 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 PLET1Q6UQ28 207 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 MIPEPQ99797 713 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 TAC3Q9UHF0 121 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 NEMP2A6NFY4 417 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 E7ENX8 843 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 COQ9O75208 318 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 WDR77Q9BQA1 342 aaPredicted RBP12.96□□□□□ -0.33
COL1A1-201ENST00000225964 NCDNQ9UBB6 729 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 MALT1Q9UDY8 824 aa12.96□□□□□ -0.33
COL1A1-201ENST00000225964 OR51F1A6NGY5 319 aa12.96□□□□□ -0.34
COL1A1-201ENST00000225964 IDH3AP50213 366 aa12.96□□□□□ -0.34
COL1A1-201ENST00000225964 ARFRP1Q13795 201 aa12.96□□□□□ -0.34
COL1A1-201ENST00000225964 TMEM175Q9BSA9 504 aa12.96□□□□□ -0.34
COL1A1-201ENST00000225964 STRADBQ9C0K7 418 aa12.96□□□□□ -0.34
COL1A1-201ENST00000225964 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.34
COL1A1-201ENST00000225964 P2RX2Q9UBL9 471 aa12.96□□□□□ -0.34
COL1A1-201ENST00000225964 TMEM98Q9Y2Y6 226 aa12.96□□□□□ -0.34
COL1A1-201ENST00000225964 RB1P06400 928 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF806P0C7X5 589 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 ASPAP45381 313 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF41P51814 821 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 TNFAIP8L3Q5GJ75 292 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 C1orf94Q6P1W5 598 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 NXPE2Q96DL1 559 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 ZSCAN5AQ9BUG6 496 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF717Q9BY31 904 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 MEMO1Q9Y316 297 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 PRAMEF33A0A0G2JMD5 474 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 TCRBV7S2A1N4TA0A589 114 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 EME2A4GXA9 379 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 H3BSH0 61 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 IRAK2O43187 625 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 PRAMEF10O60809 474 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 FUT4P22083 530 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 NR4A1P22736 598 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 MECP2P51608 486 aaKnown RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 MTTPP55157 894 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 IRF9Q00978 393 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 SNTA1Q13424 505 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 RAB39AQ14964 217 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 CARTPTQ16568 116 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF514Q96K75 400 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms