RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 MAPK1P28482 360 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 HTR1EP28566 365 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 FAM174BQ3ZCQ3 159 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 ATAT1Q5SQI0 421 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 CANT1Q8WVQ1 401 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 KXD1Q9BQD3 176 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 MAGEA13PA6NCF6 341 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 ZNF839A8K0R7 811 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 RFXAPO00287 272 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 KCNH1O95259 989 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 C1orf105O95561 183 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 APODP05090 189 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 PGRP06401 933 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 CLDN8P56748 225 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 RPS14P62263 151 aaKnown RBP28.84■■■□□ 2.21
PABPN1-201ENST00000216727 SPPL2CQ8IUH8 684 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 OR8J3Q8NGG0 315 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 LRTOMTQ8WZ04 291 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 GTF2H4Q92759 462 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 STON1Q9Y6Q2 735 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 C5orf42Q9H799 3197 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 CSTF3Q12996 717 aaKnown RBP28.83■■■□□ 2.21
PABPN1-201ENST00000216727 MED21Q13503 144 aa28.83■■■□□ 2.21
PABPN1-201ENST00000216727 AASDHQ4L235 1098 aaPredicted RBP28.83■■■□□ 2.21
PABPN1-201ENST00000216727 XKR6Q5GH73 641 aa28.83■■■□□ 2.21
PABPN1-201ENST00000216727 XKR5Q6UX68 686 aa28.83■■■□□ 2.21
PABPN1-201ENST00000216727 ZNF547Q8IVP9 402 aa28.83■■■□□ 2.21
PABPN1-201ENST00000216727 HIC2Q96JB3 615 aa28.83■■■□□ 2.21
PABPN1-201ENST00000216727 DLGAP4Q9Y2H0 992 aa28.83■■■□□ 2.21
PABPN1-201ENST00000216727 DHRS12A0PJE2 317 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 CD22P20273 847 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 HNF4AP41235 474 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 MAPKAPK3Q16644 382 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 ITPRIPL2Q3MIP1 535 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 SPANXN4Q5MJ08 99 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 ADAMTSL4Q6UY14 1074 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 KRTCAP2Q8N6L1 136 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 WDR20Q8TBZ3 569 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 PPM1MQ96MI6 270 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 OR4K3Q96R72 315 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 NEUROG3Q9Y4Z2 214 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 LAMP2P13473 410 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 ZNF8P17098 575 aaPredicted RBP28.82■■■□□ 2.2
PABPN1-201ENST00000216727 GDI1P31150 447 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 DRD3P35462 400 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 GRHL2Q6ISB3 625 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 IFNEQ86WN2 208 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 OR2L2Q8NH16 312 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 MED8Q96G25 268 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 COX14Q96I36 57 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 RSPH9Q9H1X1 276 aaPredicted RBP28.82■■■□□ 2.2
PABPN1-201ENST00000216727 VCXQ9H320 206 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 DPEP2Q9H4A9 486 aa28.82■■■□□ 2.2
PABPN1-201ENST00000216727 E7EQ34 232 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 H0YIV9 168 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 AP1G1O43747 822 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 DOC2AQ14183 400 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 E2F2Q14209 437 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 PARM1Q6UWI2 310 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 FGF14Q92915 247 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 FCRL1Q96LA6 429 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 GPRC5BQ9NZH0 403 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 POP7O75817 140 aaKnown RBP28.81■■■□□ 2.2
PABPN1-201ENST00000216727 GPIP06744 558 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 AMD1P17707 334 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 PSMA4P25789 261 aaKnown RBP28.81■■■□□ 2.2
PABPN1-201ENST00000216727 PROSER1Q86XN7 944 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 DNAJB8Q8NHS0 232 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 HM13Q8TCT9 377 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 APIPQ96GX9 242 aa28.81■■■□□ 2.2
PABPN1-201ENST00000216727 FOLH1Q04609 750 aa28.8■■■□□ 2.2
PABPN1-201ENST00000216727 RAB26Q9ULW5 256 aa28.8■■■□□ 2.2
PABPN1-201ENST00000216727 PCDHB3Q9Y5E6 796 aa28.8■■■□□ 2.2
PABPN1-201ENST00000216727 MGAT4DA6NG13 374 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 EIF4E1BA6NMX2 242 aaKnown RBP28.79■■■□□ 2.2
PABPN1-201ENST00000216727 H0YJX3 145 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 CLGNO14967 610 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 CEP290O15078 2479 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 HNRNPRO43390 633 aaKnown RBP28.79■■■□□ 2.2
PABPN1-201ENST00000216727 SMNDC1O75940 238 aaKnown RBP eCLIP28.79■■■□□ 2.28e-8■□□□□ 11
PABPN1-201ENST00000216727 SDC1P18827 310 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 IL10P22301 178 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 HSPA13P48723 471 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 CAMK2GQ13555 558 aaPredicted RBP28.79■■■□□ 2.2
PABPN1-201ENST00000216727 TMEM154Q6P9G4 183 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 ERMP1Q7Z2K6 904 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 CSGALNACT1Q8TDX6 532 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 EME1Q96AY2 570 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 TESCQ96BS2 214 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 METTL2AQ96IZ6 378 aaKnown RBP28.79■■■□□ 2.2
PABPN1-201ENST00000216727 SPATA6Q9NWH7 488 aaPredicted RBP28.79■■■□□ 2.2
PABPN1-201ENST00000216727 VAPAQ9P0L0 249 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 SCOCQ9UIL1 159 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 KANSL1LA0AUZ9 987 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 A6NHS1 94 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 DENRO43583 198 aaKnown RBP28.79■■■□□ 2.2
PABPN1-201ENST00000216727 HSD3B1P14060 373 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 HSD3B2P26439 372 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 CST6Q15828 149 aa28.79■■■□□ 2.2
PABPN1-201ENST00000216727 AGBL4Q5VU57 503 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms