RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Tnfsf4P43488 198 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 FcrlbQ5DRQ8 427 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Olfr1122Q8VGT9 326 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Cmtm3Q99LJ5 184 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Asb12Q9D738 308 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Yipf5Q9EQQ2 257 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Ndrg3Q9QYF9 375 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Ttc39aA2ACP1 578 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Catsperg2C6KI89 1145 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 PdynO35417 248 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Tas2r16P59529 299 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Mef2dQ63943 514 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Saysd1Q8K190 188 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 DeraQ91YP3 318 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 DdoQ922Z0 341 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 CutalQ9D1U5 156 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Tsga13Q9DA17 273 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Oxct2aQ9JJN4 520 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Il3P01586 166 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Scrn3Q3TMH2 418 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Nudt18Q3U2V3 323 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Rsrp1Q3UC65 298 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Msi1Q61474 362 aaKnown RBP16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Ppp1r8Q8R3G1 351 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Zdhhc7Q91WU6 308 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 OptcQ920A0 328 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Pop5Q9DB28 169 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Jph1Q9ET80 660 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Gm6526G3X9Q9 198 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Has3O08650 554 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Txndc15Q6P6J9 344 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Clvs2Q8BG92 327 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Ldhal6bQ8BVP2 382 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Adnp2Q8CHC8 1165 aaKnown RBP16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Glis1Q8K1M4 789 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 9030624G23RikQ9D308 155 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Arl5bQ9D4P0 179 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 DpysQ9EQF5 519 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Scgb2b17S4R2V3 82 aa16.41■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Dlg5E9Q9R9 1921 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Gstm5P48774 224 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Cntn3Q07409 1028 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Tmem181aQ3U3W2 474 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Zfp438Q8BFX2 798 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Cstf2Q8BIQ5 580 aaKnown RBP16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Ccdc126Q8BIS8 140 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 LnpepQ8C129 1025 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Sf3b4Q8QZY9 424 aaKnown RBP16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 BollQ924M5 281 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Rassf1Q99MK9 340 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Mgrn1Q9D074 532 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Kndc1Q0KK55 1742 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Mtnd2P03893 345 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Pyroxd2Q3U4I7 581 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Zbtb24Q80X44 710 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Msantd1Q8BIL2 278 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Kctd2Q8CEZ0 266 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Cyp4v2Q9DBW0 525 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 GabrqQ9JLF1 638 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Spin2gA0A0N4SW15 236 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 4930433I11RikA0A0U1RPT6 723 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Cd300ld2A2A7W0 305 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 PiggD3Z3Y1 983 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Vmn2r73D3Z7M3 851 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Spin2eJ3QNQ0 234 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Olfr603L7N1Y4 312 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Tpst2O88856 376 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Slc2a7P0C6A1 513 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 GcP21614 476 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Pip5k1bP70181 539 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Osbp2Q5QNQ6 908 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Bcl2l1Q64373 233 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Ddx51Q6P9R1 639 aaKnown RBP16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 N6amt1Q6SKR2 214 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Gipc3Q8R5M0 297 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Exoc2Q9D4H1 924 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Gbe1Q9D6Y9 702 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Efcab9Q9DAM2 216 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Pak1ip1Q9DCE5 382 aaKnown RBP16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Gsk3bQ9WV60 420 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 SncgQ9Z0F7 123 aaKnown RBP16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Ube2ql1A0PJN4 161 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Xlr5aA2BI45 236 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 H2-M11F6U8V3 335 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Gtf2h4O70422 463 aaKnown RBP16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Cxcr3O88410 367 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Rnf157Q3TEL6 685 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Cdkl4Q3TZA2 342 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Cnpy1Q4VAB4 94 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 PterQ60866 349 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Ttc23Q8CHY7 488 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Acbd6Q9D061 282 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Carm1Q9WVG6 608 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Gys1Q9Z1E4 738 aaKnown RBP16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Sh3yl1O08641 340 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Icam1P13597 537 aaKnown RBP16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Gas1Q01721 343 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Wnt8aQ64527 354 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Serpinb9fQ80UK5 377 aa16.4■□□□□ 0.22
Col17a1-201ENSMUST00000026045 Aoc1Q8JZQ5 751 aa16.4■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms