RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 MED16Q9Y2X0 877 aa13.78□□□□□ -0.2
SDHD-209ENST00000640554 PCDHB3Q9Y5E6 796 aa13.78□□□□□ -0.2
SDHD-209ENST00000640554 TARM1B6A8C7 271 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 GFYI3L273 518 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 KIAA0754O94854 1291 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 HBQ1P09105 142 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 GABRB3P28472 473 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 OAS2P29728 719 aaKnown RBP13.77□□□□□ -0.21
SDHD-209ENST00000640554 PLTPP55058 493 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 MC1RQ01726 317 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 CYP2A13Q16696 494 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 CRTC2Q53ET0 693 aaPredicted RBP13.77□□□□□ -0.21
SDHD-209ENST00000640554 GLE1Q53GS7 698 aaKnown RBP13.77□□□□□ -0.21
SDHD-209ENST00000640554 HP1BP3Q5SSJ5 553 aaPredicted RBP13.77□□□□□ -0.21
SDHD-209ENST00000640554 C8orf74Q6P047 294 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 ANKMY2Q8IV38 441 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 WDFY3Q8IZQ1 3526 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 C19orf47Q8N9M1 422 aaKnown RBP13.77□□□□□ -0.21
SDHD-209ENST00000640554 CD200R1Q8TD46 325 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 CDKL2Q92772 493 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 N4BP2L2Q92802 583 aaPredicted RBP13.77□□□□□ -0.21
SDHD-209ENST00000640554 WBP1Q96G27 269 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 PWWP2AQ96N64 755 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 LRFN5Q96NI6 719 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 PLAC1Q9HBJ0 212 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 WDR70Q9NW82 654 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 SPHK1Q9NYA1 384 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 GALPQ9UBC7 116 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 VWA7Q9Y334 891 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 NFS1Q9Y697 457 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 AP1M2Q9Y6Q5 423 aa13.77□□□□□ -0.21
SDHD-209ENST00000640554 MYO1CO00159 1063 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 SLC16A5O15375 505 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 EFSO43281 561 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 CPNE3O75131 537 aaKnown RBP13.76□□□□□ -0.21
SDHD-209ENST00000640554 RECKO95980 971 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 KLK3P07288 261 aaPredicted RBP13.76□□□□□ -0.21
SDHD-209ENST00000640554 STAT5AP42229 794 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 KCNAB1Q14722 419 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 SF1Q15637 639 aaKnown RBP13.76□□□□□ -0.21
SDHD-209ENST00000640554 ARHGAP40Q5TG30 622 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 FAM45BPQ6NSW5 357 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 PWWP2BQ6NUJ5 590 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 TRMT10BQ6PF06 316 aaKnown RBP13.76□□□□□ -0.21
SDHD-209ENST00000640554 CYHR1Q6ZMK1 362 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 TIPARPQ7Z3E1 657 aaKnown RBP13.76□□□□□ -0.21
SDHD-209ENST00000640554 TMEM126BQ8IUX1 230 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 GPR135Q8IZ08 494 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 LMNTD1Q8N9Z9 388 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 LINC01555Q8NAE3 123 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 FLVCR1-AS1Q8TAF5 88 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 FAM45AQ8TCE6 357 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 MCOLN3Q8TDD5 553 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 DENND1AQ8TEH3 1009 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 SMPDL3AQ92484 453 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 SEC14L1Q92503 715 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 FAM136AQ96C01 138 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 SLC45A3Q96JT2 553 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 PPM1MQ96MI6 270 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 UBL7Q96S82 380 aaPredicted RBP13.76□□□□□ -0.21
SDHD-209ENST00000640554 WDR83Q9BRX9 315 aaKnown RBP13.76□□□□□ -0.21
SDHD-209ENST00000640554 GPN2Q9H9Y4 310 aaPredicted RBP13.76□□□□□ -0.21
SDHD-209ENST00000640554 CPNE5Q9HCH3 593 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 SAYSD1Q9NPB0 183 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
SDHD-209ENST00000640554 KCND3Q9UK17 655 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 PLAGL1Q9UM63 463 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 KLK4Q9Y5K2 254 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 AHCTF1Q8WYP5 2266 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 PIKFYVEQ9Y2I7 2098 aa13.76□□□□□ -0.21
SDHD-209ENST00000640554 CTAGE15A4D2H0 777 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 ARHGEF33A8MVX0 844 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 C21orf140B9A014 251 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 PRICKLE3O43900 615 aaPredicted RBP13.75□□□□□ -0.21
SDHD-209ENST00000640554 SCRG1O75711 98 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 ITGB2P05107 769 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 C8GP07360 202 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 CTAGE8P0CG41 777 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 ERGP11308 486 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 ITGA1P56199 1179 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 IL2P60568 153 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 MRPS25P82663 173 aaKnown RBP13.75□□□□□ -0.21
SDHD-209ENST00000640554 SP140Q13342 867 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 PDAP1Q13442 181 aaKnown RBP13.75□□□□□ -0.21
SDHD-209ENST00000640554 GPR19Q15760 415 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 ZC3H12BQ5HYM0 836 aaKnown RBP13.75□□□□□ -0.21
SDHD-209ENST00000640554 FBXO38Q6PIJ6 1188 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 C3orf62Q6ZUJ4 267 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 CTAGE6Q86UF2 777 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 CTAGE4Q8IX94 777 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 MYO1HQ8N1T3 1032 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 GIMAP7Q8NHV1 300 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 FBXO25Q8TCJ0 367 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 ANKRD7Q92527 254 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 PDLIM5Q96HC4 596 aaKnown RBP13.75□□□□□ -0.21
SDHD-209ENST00000640554 VPS39Q96JC1 886 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 ELMO2Q96JJ3 720 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 SLC30A3Q99726 388 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 DPH2Q9BQC3 489 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms