RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 SOX30O94993 753 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 HNRNPKP61978 463 aaKnown RBP eCLIP10.79□□□□□ -0.68
SCN1B-208ENST00000640135 ABATP80404 500 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 RALGDSQ12967 914 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 TAB1Q15750 504 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 PIK3R6Q5UE93 754 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 GK5Q6ZS86 529 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 ZCCHC7Q8N3Z6 543 aaKnown RBP10.79□□□□□ -0.68
SCN1B-208ENST00000640135 OXR1Q8N573 874 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 ZNF540Q8NDQ6 660 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 RNASE11Q8TAA1 199 aaKnown RBP10.79□□□□□ -0.68
SCN1B-208ENST00000640135 EEF1AKMT1Q8WVE0 214 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 GLYATL1Q969I3 302 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 TOP1MTQ969P6 601 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 ZNF347Q96SE7 839 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 GPR22Q99680 433 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 ZCCHC3Q9NUD5 404 aaKnown RBP10.79□□□□□ -0.68
SCN1B-208ENST00000640135 MS4A12Q9NXJ0 267 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 CYP8B1Q9UNU6 501 aa10.79□□□□□ -0.68
SCN1B-208ENST00000640135 A0A0J9YVX5 310 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 MATN2O00339 956 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 CHST10O43529 356 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 REM1O75628 298 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 HNRNPCP07910 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 FGFR3P22607 806 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 Q6ZVL8 140 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 PRSS58Q8IYP2 241 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 ZSCAN1Q8NBB4 408 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 MTERF1Q99551 399 aaKnown RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 NPAS2Q99743 824 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 RBM4BQ9BQ04 359 aaKnown RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 C17orf62Q9BQA9 187 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 RBM4Q9BWF3 364 aaKnown RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 HSD3B7Q9H2F3 369 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 KDM3BQ7LBC6 1761 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 SLC18A1P54219 525 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 CACNA2D1P54289 1103 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 OGDHQ02218 1023 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 NFATC2Q13469 925 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 NEDD8Q15843 81 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 IFI44LQ53G44 452 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 ZCCHC12Q6PEW1 402 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 AGTRAPQ6RW13 159 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 TMIGD1Q6UXZ0 262 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 DPY19L3Q6ZPD9 716 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 CLNKQ7Z7G1 428 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 ADGRG6Q86SQ4 1221 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 THOC6Q86W42 341 aaKnown RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 ZC3HC1Q86WB0 502 aaKnown RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 BPIFB6Q8NFQ5 453 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 SLC5A11Q8WWX8 675 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 NCSTNQ92542 709 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 MRPS26Q9BYN8 205 aaKnown RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 NEUROD4Q9HD90 331 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 TAC3Q9UHF0 121 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 KCNK6Q9Y257 313 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 SH3GLB1Q9Y371 365 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 SPIN1Q9Y657 262 aaPredicted RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 TNFRSF11BO00300 401 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 HCRTO43612 131 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 ECI2O75521 394 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 CFHP08603 1231 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 EBLN1P0CF75 366 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 PGDP52209 483 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 NCBP2P52298 156 aaKnown RBP eCLIP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 LIPEQ05469 1076 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 KRT77Q7Z794 578 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 VANGL1Q8TAA9 524 aaPredicted RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 KLHL6Q8WZ60 621 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 AP3S1Q92572 193 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 RFKQ969G6 155 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 KIAA1191Q96A73 305 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 IMP4Q96G21 291 aaKnown RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 ADAP2Q9NPF8 381 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 OXSMQ9NWU1 459 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 LYARQ9NX58 379 aaKnown RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 CKLFQ9UBR5 152 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 EGFL7Q9UHF1 273 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 STX16-NPEPL1H3BU86 382 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 STX16O14662 325 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 SCAMP1O15126 338 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 RNGTTO60942 597 aaKnown RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 ALPPP05187 535 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 RPS6KA3P51812 740 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 CLDN10P78369 228 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 NRG1Q02297 640 aaPredicted RBP10.78□□□□□ -0.68
SCN1B-208ENST00000640135 SEMG2Q02383 582 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 PLA2G15Q8NCC3 412 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 LMO3Q8TAP4 145 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 Q9N2J8 555 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 CIDEBQ9UHD4 219 aa10.78□□□□□ -0.68
SCN1B-208ENST00000640135 NDUFS4O43181 175 aa10.77□□□□□ -0.68
SCN1B-208ENST00000640135 ENDOUP21128 410 aaKnown RBP10.77□□□□□ -0.68
SCN1B-208ENST00000640135 CTSKP43235 329 aa10.77□□□□□ -0.68
SCN1B-208ENST00000640135 NRF1Q16656 503 aa10.77□□□□□ -0.68
SCN1B-208ENST00000640135 QPCTQ16769 361 aa10.77□□□□□ -0.68
SCN1B-208ENST00000640135 LCN1P1Q5VSP4 162 aa10.77□□□□□ -0.68
SCN1B-208ENST00000640135 C14orf80Q86SX3 495 aa10.77□□□□□ -0.68
SCN1B-208ENST00000640135 CILP2Q8IUL8 1156 aa10.77□□□□□ -0.68
SCN1B-208ENST00000640135 TMEM156Q8N614 296 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms