RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 STARD5Q9NSY2 213 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 C20orf96Q9NUD7 363 aaPredicted RBP17.08■□□□□ 0.32
PTPN11-207ENST00000639857 PYCARDQ9ULZ3 195 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 MEN1O00255 615 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 NDC80O14777 642 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 RAB40ALP0C0E4 278 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 FAM87AP0C7U9 286 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 PRKAR1AP10644 381 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 IVDP26440 423 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 PTPN4P29074 926 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 SLC1A2P43004 574 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 PAFAH1B1P43034 410 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 GABRA4P48169 554 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 POLE2P56282 527 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 DR1Q01658 176 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 CRYMQ14894 314 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 NAA25Q14CX7 972 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 SYVN1Q86TM6 617 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 TRIM73Q86UV7 250 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 APOBEC4Q8WW27 367 aaKnown RBP17.07■□□□□ 0.32
PTPN11-207ENST00000639857 MR1Q95460 341 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 CLIP3Q96DZ5 547 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 CAPZA3Q96KX2 299 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 ACTL8Q9H568 366 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 FAM114A2Q9NRY5 505 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 IL1RAPL1Q9NZN1 696 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 FBXO5Q9UKT4 447 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 SRPK3Q9UPE1 567 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 POLHQ9Y253 713 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 MRPS18BQ9Y676 258 aaKnown RBP17.07■□□□□ 0.32
PTPN11-207ENST00000639857 CFAP46Q8IYW2 2715 aa17.07■□□□□ 0.32
PTPN11-207ENST00000639857 B8ZZF3 427 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 H3BMH7 237 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 EIF3FO00303 357 aaPredicted RBP17.06■□□□□ 0.32
PTPN11-207ENST00000639857 KATNA1O75449 491 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 ENO3P13929 434 aaPredicted RBP17.06■□□□□ 0.32
PTPN11-207ENST00000639857 CLCN7P51798 805 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 ZIC1Q15915 447 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 SPANXN3Q5MJ09 141 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 C16orf46Q6P387 395 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 TLDC1Q6P9B6 456 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 CNSTQ6PJW8 725 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 KCNMB4Q86W47 210 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 DENND6AQ8IWF6 608 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 PDIK1LQ8N165 341 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 SLC38A9Q8NBW4 561 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 PROKR1Q8TCW9 393 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 LRRC39Q96DD0 335 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 EBNA1BP2Q99848 306 aaKnown RBP17.06■□□□□ 0.32
PTPN11-207ENST00000639857 C17orf62Q9BQA9 187 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 SLC7A5P2Q9GIP4 190 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 KLHL25Q9H0H3 589 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 FAM60AQ9NP50 221 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 ENAMQ9NRM1 1142 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 PCMTD2Q9NV79 361 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 PLCL2Q9UPR0 1127 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 KLK4Q9Y5K2 254 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 NFS1Q9Y697 457 aa17.06■□□□□ 0.32
PTPN11-207ENST00000639857 BOD1L1Q8NFC6 3051 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 TLN1Q9Y490 2541 aaKnown RBP17.05■□□□□ 0.32
PTPN11-207ENST00000639857 TARM1B6A8C7 271 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 ZNF749O43361 778 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 PRICKLE3O43900 615 aaPredicted RBP17.05■□□□□ 0.32
PTPN11-207ENST00000639857 PSIP1O75475 530 aaKnown RBP17.05■□□□□ 0.32
PTPN11-207ENST00000639857 OR2B3O76000 313 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 CBSLP0DN79 551 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 ERGP11308 486 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 CBSP35520 551 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 HSD17B2P37059 387 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 BDKRB1P46663 353 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 KCNAB2Q13303 367 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 CTBP1Q13363 440 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 ARHGAP19Q14CB8 494 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 CYP2A13Q16696 494 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 UGT8Q16880 541 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 LRRC8EQ6NSJ5 796 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 RHBDD2Q6NTF9 364 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 KIAA0408Q6ZU52 694 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 GALNT7Q86SF2 657 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 ZNF605Q86T29 641 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 CNTN4Q8IWV2 1026 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 KLHL7Q8IXQ5 586 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 SYTL1Q8IYJ3 562 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 DNAJC22Q8N4W6 341 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 LMNTD1Q8N9Z9 388 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 FBXO15Q8NCQ5 510 aaPredicted RBP17.05■□□□□ 0.32
PTPN11-207ENST00000639857 DENND1AQ8TEH3 1009 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 THAP4Q8WY91 577 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 RNF31Q96EP0 1072 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 NLNQ9BYT8 704 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 SLC25A18Q9H1K4 315 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 FBXO6Q9NRD1 293 aaPredicted RBP17.05■□□□□ 0.32
PTPN11-207ENST00000639857 HEATR5BQ9P2D3 2071 aa17.05■□□□□ 0.32
PTPN11-207ENST00000639857 SPTA1P02549 2419 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 MYO1CO00159 1063 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 ZSCAN9O15535 394 aaPredicted RBP17.04■□□□□ 0.32
PTPN11-207ENST00000639857 CATP04040 527 aaKnown RBP17.04■□□□□ 0.32
PTPN11-207ENST00000639857 MPC1LP0DKB6 136 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 MAGP20916 626 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 AGXTP21549 392 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms