RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CPNE3O75131 537 aaKnown RBP18.12■□□□□ 0.49
SCARB2-213ENST00000638680 CLPXO76031 633 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 DBIP07108 87 aaKnown RBP18.12■□□□□ 0.49
SCARB2-213ENST00000638680 SLC6A4P31645 630 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 C6orf183Q5T699 404 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 FAXDC2Q96IV6 333 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 LMLNQ96KR4 655 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 MCCC1Q96RQ3 725 aaPredicted RBP18.12■□□□□ 0.49
SCARB2-213ENST00000638680 GLUD1P00367 558 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 TSTQ16762 297 aaKnown RBP18.11■□□□□ 0.49
SCARB2-213ENST00000638680 GHDCQ8N2G8 530 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 NKD1Q969G9 470 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 ZIM2Q9NZV7 527 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 IGKV6D-41A0A0C4DH26 115 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 CCL16O15467 120 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 UFM1P61960 85 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 FAM53CQ9NYF3 392 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 CLIC1O00299 241 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 CCRL2O00421 344 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 BCAS2O75934 225 aaPredicted RBP18.11■□□□□ 0.49
SCARB2-213ENST00000638680 POP4O95707 220 aaKnown RBP18.11■□□□□ 0.49
SCARB2-213ENST00000638680 DNASE1L3Q13609 305 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 OR2T5Q6IEZ7 315 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 PIM3Q86V86 326 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 ENDOVQ8N8Q3 282 aaKnown RBP18.11■□□□□ 0.49
SCARB2-213ENST00000638680 ATP6V1C2Q8NEY4 427 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 OR9I1Q8NGQ6 314 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 OR2T29Q8NH02 315 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 SCAMP5Q8TAC9 235 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 ZNF641Q96N77 438 aaPredicted RBP18.11■□□□□ 0.49
SCARB2-213ENST00000638680 SLC2A6Q9UGQ3 507 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 PTPRJQ12913 1337 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 A0A1W2PRB8 838 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 PSMD9O00233 223 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 OPN1SWP03999 348 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 GNAZP19086 355 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 NUDT6P53370 316 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 PLA2G16P53816 162 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 PPP3R1P63098 170 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 RHDQ02161 417 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 SLC25A11Q02978 314 aaKnown RBP18.11■□□□□ 0.49
SCARB2-213ENST00000638680 PCLAFQ15004 111 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 MOGQ16653 247 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 MEP1AQ16819 746 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 SNAP47Q5SQN1 464 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 XKR5Q6UX68 686 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 SLC24A5Q71RS6 500 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 CAND1Q86VP6 1230 aaKnown RBP18.11■□□□□ 0.49
SCARB2-213ENST00000638680 ZCCHC10Q8TBK6 192 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 MED11Q9P086 117 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 ACTR3BQ9P1U1 418 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 MLXQ9UH92 298 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 PHF24Q9UPV7 400 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 VARSP26640 1264 aaKnown RBP18.11■□□□□ 0.49
SCARB2-213ENST00000638680 AVPR1BP47901 424 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 FOXM1Q08050 763 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 ZNF234Q14588 700 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 CRB2Q5IJ48 1285 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 CES5AQ6NT32 575 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 NIPAL1Q6NVV3 410 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 SLC30A8Q8IWU4 369 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 OXR1Q8N573 874 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 CACNG4Q9UBN1 327 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 COLEC10Q9Y6Z7 277 aa18.11■□□□□ 0.49
SCARB2-213ENST00000638680 AHSGP02765 367 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 ALPPP05187 535 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 SEMG2Q02383 582 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 CLEC12AQ5QGZ9 265 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 ZC3HC1Q86WB0 502 aaKnown RBP18.1■□□□□ 0.49
SCARB2-213ENST00000638680 BIRC7Q96CA5 298 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 KDM4BO94953 1096 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 LDOC1O95751 146 aaPredicted RBP18.1■□□□□ 0.49
SCARB2-213ENST00000638680 KELP23276 732 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 DDX6P26196 483 aaKnown RBP eCLIP18.1■□□□□ 0.49
SCARB2-213ENST00000638680 CCSAPQ6IQ19 270 aaPredicted RBP18.1■□□□□ 0.49
SCARB2-213ENST00000638680 PSRC1Q6PGN9 363 aaPredicted RBP18.1■□□□□ 0.49
SCARB2-213ENST00000638680 ZNF517Q6ZMY9 492 aaPredicted RBP18.1■□□□□ 0.49
SCARB2-213ENST00000638680 SLC35A5Q9BS91 424 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 MYO5BQ9ULV0 1848 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 YES1P07947 543 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 PRPS1L1P21108 318 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 PPM1AP35813 382 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 LRRC73Q5JTD7 316 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 UBXN11Q5T124 520 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 OR4F3Q6IEY1 312 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 RBM23Q86U06 439 aaKnown RBP18.1■□□□□ 0.49
SCARB2-213ENST00000638680 PLD4Q96BZ4 506 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 RPL10LQ96L21 214 aaKnown RBP18.1■□□□□ 0.49
SCARB2-213ENST00000638680 TMEM74Q96NL1 305 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 HAPLN3Q96S86 360 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 CRISP3P54108 245 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 SIRPB2Q5JXA9 342 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 ZCCHC12Q6PEW1 402 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 ARMC10Q8N2F6 343 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 ZBED6CLQ96FA7 236 aaPredicted RBP18.1■□□□□ 0.49
SCARB2-213ENST00000638680 POFUT2Q9Y2G5 429 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 WDR37Q9Y2I8 494 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 SERPINA3P01011 423 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 SLC15A1P46059 708 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 STXBP1P61764 594 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms