RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 C9orf43Q8TAL5 461 aaPredicted RBP17.08■□□□□ 0.32
PNKP-230ENST00000638016 DENND1AQ8TEH3 1009 aa17.08■□□□□ 0.32
PNKP-230ENST00000638016 LRFN5Q96NI6 719 aa17.08■□□□□ 0.32
PNKP-230ENST00000638016 FBXO6Q9NRD1 293 aaPredicted RBP17.08■□□□□ 0.32
PNKP-230ENST00000638016 SERTAD3Q9UJW9 196 aa17.08■□□□□ 0.32
PNKP-230ENST00000638016 FARSAQ9Y285 508 aaKnown RBP17.08■□□□□ 0.32
PNKP-230ENST00000638016 TP53TG5Q9Y2B4 290 aa17.08■□□□□ 0.32
PNKP-230ENST00000638016 MAN2B2Q9Y2E5 1009 aa17.08■□□□□ 0.32
PNKP-230ENST00000638016 SPENQ96T58 3664 aaKnown RBP17.08■□□□□ 0.32
PNKP-230ENST00000638016 TENM4Q6N022 2769 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 FAM237BA0A1B0GVD1 139 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 RASGRF2O14827 1237 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 ZSCAN12O43309 604 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 SUV39H1O43463 412 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 OR2B3O76000 313 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 C1orf105O95561 183 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 PDGFAP04085 211 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 KLK3P07288 261 aaPredicted RBP17.07■□□□□ 0.32
PNKP-230ENST00000638016 SFTPCP11686 197 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 OGNP20774 298 aaKnown RBP17.07■□□□□ 0.32
PNKP-230ENST00000638016 RPS15P62841 145 aaKnown RBP17.07■□□□□ 0.32
PNKP-230ENST00000638016 YBX1P67809 324 aaKnown RBP17.07■□□□□ 0.32
PNKP-230ENST00000638016 SARNPP82979 210 aaKnown RBP17.07■□□□□ 0.32
PNKP-230ENST00000638016 FASTKQ14296 549 aaKnown RBP17.07■□□□□ 0.32
PNKP-230ENST00000638016 GBX1Q14549 363 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 SLC9A5Q14940 896 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 KIR2DS3Q14952 304 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 SLC5A12Q1EHB4 618 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.07■□□□□ 0.32
PNKP-230ENST00000638016 IZUMO3Q5VZ72 239 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 SDCCAG8Q86SQ7 713 aaPredicted RBP17.07■□□□□ 0.32
PNKP-230ENST00000638016 DNAJC22Q8N4W6 341 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 ZNF655Q8N720 491 aaPredicted RBP17.07■□□□□ 0.32
PNKP-230ENST00000638016 OR2L8Q8NGY9 312 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 GIMAP7Q8NHV1 300 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 N4BP2L2Q92802 583 aaPredicted RBP17.07■□□□□ 0.32
PNKP-230ENST00000638016 TCTN2Q96GX1 697 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 CAPZA3Q96KX2 299 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 SLC7A5P2Q9GIP4 190 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 SYTL2Q9HCH5 934 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 SAMD15Q9P1V8 674 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 DHCR7Q9UBM7 475 aaKnown RBP17.07■□□□□ 0.32
PNKP-230ENST00000638016 PYCARDQ9ULZ3 195 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 MED16Q9Y2X0 877 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 MAD1L1Q9Y6D9 718 aa17.07■□□□□ 0.32
PNKP-230ENST00000638016 SDR42E2A6NKP2 422 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 S1PR4O95977 384 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 MLNP12872 115 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 PKMP14618 531 aaKnown RBP17.06■□□□□ 0.32
PNKP-230ENST00000638016 CHRM3P20309 590 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 GRIA3P42263 894 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 SLC1A2P43004 574 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 FNTAP49354 379 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 MPP1Q00013 466 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 UGT8Q16880 541 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 RNASEH2BQ5TBB1 312 aaKnown RBP17.06■□□□□ 0.32
PNKP-230ENST00000638016 FCRL6Q6DN72 434 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 ZNF549Q6P9A3 640 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 SYVN1Q86TM6 617 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 SIGLEC10Q96LC7 697 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 NAP1L3Q99457 506 aaPredicted RBP17.06■□□□□ 0.32
PNKP-230ENST00000638016 GPR87Q9BY21 358 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 XAB2Q9HCS7 855 aaKnown RBP17.06■□□□□ 0.32
PNKP-230ENST00000638016 TUBD1Q9UJT1 453 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 TLK1Q9UKI8 766 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 SLC39A10Q9ULF5 831 aa17.06■□□□□ 0.32
PNKP-230ENST00000638016 ARGFXA6NJG6 315 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 FANCGO15287 622 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 MAP3K7O43318 606 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 PRICKLE3O43900 615 aaPredicted RBP17.05■□□□□ 0.32
PNKP-230ENST00000638016 ESR1P03372 595 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 RPN2P04844 631 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 PAMP19021 973 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 MCM3P25205 808 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 PTGIRP43119 386 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 PMS2P54278 862 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 CUL1Q13616 776 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 PPP1R7Q15435 360 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 MSS51Q4VC12 460 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 RNF187Q5TA31 235 aaPredicted RBP17.05■□□□□ 0.32
PNKP-230ENST00000638016 GPR135Q8IZ08 494 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 DTWD1Q8N5C7 304 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 ZBTB2Q8N680 514 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 GSDMBQ8TAX9 411 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 ADAMTS17Q8TE56 1095 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 PWWP2AQ96N64 755 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 IRAK4Q9NWZ3 460 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 SLC17A6Q9P2U8 582 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 TCFL5Q9UL49 500 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 SNX7Q9UNH6 387 aa17.05■□□□□ 0.32
PNKP-230ENST00000638016 GOLGA6L10A0A0M3HER8 536 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 A0A1W2PPV9 198 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 CTAGE9A4FU28 777 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 ARHGEF33A8MVX0 844 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 ZSCAN9O15535 394 aaPredicted RBP17.04■□□□□ 0.32
PNKP-230ENST00000638016 CNOT3O75175 753 aaKnown RBP17.04■□□□□ 0.32
PNKP-230ENST00000638016 CLCN7P51798 805 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 THOC5Q13769 683 aaKnown RBP17.04■□□□□ 0.32
PNKP-230ENST00000638016 NCF4Q15080 339 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 SF1Q15637 639 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms