RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 ARHGEF33A8MVX0 844 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 H3BNX3 289 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 KPNA5O15131 536 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 ARPC2O15144 300 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 LINC01565O15544 149 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 RNASEH1O60930 286 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 RSL1D1O76021 490 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 STATHP02808 62 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 ASLP04424 464 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 RB1P06400 928 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 UQCRBP14927 111 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 FASP25445 335 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 RHDQ02161 417 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 ELAVL3Q14576 367 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 ZIK1Q3SY52 487 aaPredicted RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 FAM180BQ6P0A1 224 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 NUDT18Q6ZVK8 323 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 THOC6Q86W42 341 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 GPR65Q8IYL9 337 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 ST13P4Q8IZP2 240 aaPredicted RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 PGBD3Q8N328 593 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 HDDC3Q8N4P3 179 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 FAM120BQ96EK7 910 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 PDLIM5Q96HC4 596 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 MRGPRX3Q96LB0 322 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 ASB16Q96NS5 453 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 SH3GL3Q99963 347 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 RPP25Q9BUL9 199 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 KCNE2Q9Y6J6 123 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 U3KQV3 271 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 XIRP2A4UGR9 3374 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 MGAT4DA6NG13 374 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 LSM1O15116 133 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 MID1O15344 667 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 ZNF682O95780 498 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 TGFB1P01137 390 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 PGRP06401 933 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 LYNP07948 512 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 EBLN1P0CF75 366 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 ADRB3P13945 408 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 COX7A2P14406 83 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 TACR1P25103 407 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 RPS14P62263 151 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 EMX2Q04743 252 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 CNTN1Q12860 1018 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 RUNX3Q13761 415 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 BLMHQ13867 455 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 SKIV2LQ15477 1246 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 HNRNPA1L2Q32P51 320 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 PRSS36Q5K4E3 855 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 LDLRAP1Q5SW96 308 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 TMTC4Q5T4D3 741 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 EGFLAMQ63HQ2 1017 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 FRG2Q64ET8 278 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 PRMT9Q6P2P2 845 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 DSG4Q86SJ6 1040 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 CLEC4FQ8N1N0 589 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 TRAM1L1Q8N609 369 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 MAGEE2Q8TD90 523 aaPredicted RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 TIFAQ96CG3 184 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 APIPQ96GX9 242 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 FRG2BQ96QU4 278 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 SLC2A11Q9BYW1 496 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 ZCCHC2Q9C0B9 1178 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 SUCOQ9UBS9 1254 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 DLGAP4Q9Y2H0 992 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 OR1A2Q9Y585 309 aa9.43□□□□□ -0.9
CACNA1A-248ENST00000637774 NOTCH4Q99466 2003 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 TBC1D3DA0A087WVF3 549 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 TBC1D3IA0A087WXS9 549 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 TBC1D3EA0A087X179 549 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 TBC1D3KA0A087X1G2 549 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 TRBV5-4A0A0C4DH59 114 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 EDDM13A0A1B0GTR0 161 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 TBC1D3FA6NER0 549 aaPredicted RBP9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 ENO4A6NNW6 628 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 TBC1D3LB9A6J9 549 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 E7EQ34 232 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 TBC1D3HP0C7X1 549 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 MYCLP1P12525 358 aaPredicted RBP9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 BCKDHAP12694 445 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 OR4D2P58180 307 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 ELP6Q0PNE2 266 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 MAD2L1Q13257 205 aaPredicted RBP9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 CAMK2GQ13555 558 aaPredicted RBP9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 SELPLGQ14242 412 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 TBC1D3GQ6DHY5 549 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 OR4F3Q6IEY1 312 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 TBC1D3CQ6IPX1 549 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 ADNP2Q6IQ32 1131 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 VITQ6UXI7 678 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 PDSS2Q86YH6 399 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 TBC1D3Q8IZP1 549 aaPredicted RBP9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 WFIKKN2Q8TEU8 576 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 ASB11Q8WXH4 323 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 LYSMD1Q96S90 227 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 CGREF1Q99674 301 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 CCM2Q9BSQ5 444 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 SLC12A9Q9BXP2 914 aa9.42□□□□□ -0.9
CACNA1A-248ENST00000637774 CLDND1Q9NY35 253 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms