RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 HERC3Q15034 1050 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 ZC3H12BQ5HYM0 836 aaKnown RBP5.4□□□□□ -1.55
CHD2-227ENST00000637572 NADSYN1Q6IA69 706 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 MACC1Q6ZN28 852 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 ADGRG2Q8IZP9 1017 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 CPSF7Q8N684 471 aaKnown RBP5.4□□□□□ -1.55
CHD2-227ENST00000637572 TRPV3Q8NET8 790 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 ITFG1Q8TB96 612 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 SETD7Q8WTS6 366 aaKnown RBP5.4□□□□□ -1.55
CHD2-227ENST00000637572 PROX1Q92786 737 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 ERLEC1Q96DZ1 483 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 PKMYT1Q99640 499 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 HERPUD2Q9BSE4 406 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 PHF7Q9BWX1 381 aaPredicted RBP5.4□□□□□ -1.55
CHD2-227ENST00000637572 SLC17A9Q9BYT1 436 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 ATG10Q9H0Y0 220 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 C8orf4Q9NR00 106 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 NFS1Q9Y697 457 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 ANKRD11Q6UB99 2663 aaPredicted RBP5.4□□□□□ -1.55
CHD2-227ENST00000637572 SEMA4FO95754 770 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 EIF2S1P05198 315 aaKnown RBP5.4□□□□□ -1.55
CHD2-227ENST00000637572 PIM1P11309 404 aaPredicted RBP5.4□□□□□ -1.55
CHD2-227ENST00000637572 HNRNPA2B1P22626 353 aaKnown RBP5.4□□□□□ -1.55
CHD2-227ENST00000637572 PTX3P26022 381 aaPredicted RBP5.4□□□□□ -1.55
CHD2-227ENST00000637572 CLCNKAP51800 687 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 PSME3P61289 254 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 ERVK-8P63133 956 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 RAB6CQ53S08 254 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 CRTC1Q6UUV9 634 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 NET1Q7Z628 596 aaPredicted RBP5.4□□□□□ -1.55
CHD2-227ENST00000637572 ARRDC2Q8TBH0 407 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 CMTM7Q96FZ5 175 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 ZFYVE19Q96K21 471 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 OR52E6Q96RD3 313 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 PANX1Q96RD7 426 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 CDRT15Q96T59 188 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 PBX4Q9BYU1 374 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 RAB6CQ9H0N0 254 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 EIF2B4Q9UI10 523 aaKnown RBP5.4□□□□□ -1.55
CHD2-227ENST00000637572 MAGEL2Q9UJ55 1249 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 BTRCQ9Y297 605 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 OARD1Q9Y530 152 aa5.4□□□□□ -1.55
CHD2-227ENST00000637572 PRAMEF26H0Y7S4 382 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 ARHGEF15O94989 841 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 IL2RAP01589 272 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 PRKCGP05129 697 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 ARSAP15289 507 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 FDXRP22570 491 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 HLA-FP30511 346 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 ETV3P41162 512 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 AVPR1BP47901 424 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 HNRNPKP61978 463 aaKnown RBP eCLIP5.39□□□□□ -1.55
CHD2-227ENST00000637572 GALNT1Q10472 559 aaPredicted RBP5.39□□□□□ -1.55
CHD2-227ENST00000637572 KLF10Q13118 480 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 PON2Q15165 354 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 LILRA6Q6PI73 481 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 HEATR4Q86WZ0 1026 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 SLC30A8Q8IWU4 369 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 CNTN4Q8IWV2 1026 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 MTFMTQ96DP5 389 aaKnown RBP5.39□□□□□ -1.55
CHD2-227ENST00000637572 ZNF607Q96SK3 696 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 ACAT2Q9BWD1 397 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 TXLNGYQ9BZA5 131 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 ABCG8Q9H221 673 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 SCN3BQ9NY72 215 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 CALML5Q9NZT1 146 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 H2AFY2Q9P0M6 372 aaPredicted RBP5.39□□□□□ -1.55
CHD2-227ENST00000637572 TRPS1Q9UHF7 1281 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 GPR34Q9UPC5 381 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 WBP11Q9Y2W2 641 aaKnown RBP5.39□□□□□ -1.55
CHD2-227ENST00000637572 KCTD3Q9Y597 815 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 SPTBN4Q9H254 2564 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 ZCWPW2A0A1B0GU75 182 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 TTC24A2A3L6 582 aaPredicted RBP5.39□□□□□ -1.55
CHD2-227ENST00000637572 FAM220BPB1ANY3 271 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 K7ERQ8 282 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 LDLRP01130 860 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 ANXA4P09525 319 aaPredicted RBP5.39□□□□□ -1.55
CHD2-227ENST00000637572 BPIP17213 487 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 PRPS1L1P21108 318 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 PBX2P40425 430 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 MAPK12P53778 367 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 ARF5P84085 180 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 TGFBIQ15582 683 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 SPATS1Q496A3 300 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 C5orf22Q49AR2 442 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 MTX3Q5HYI7 312 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 LRRC73Q5JTD7 316 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 LIPJQ5W064 366 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 FRG2Q64ET8 278 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 AGTRAPQ6RW13 159 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 ABHD13Q7L211 337 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 NUDT13Q86X67 352 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 ADHFE1Q8IWW8 467 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 CYP4X1Q8N118 509 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 EID3Q8N140 333 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 DENND6BQ8NEG7 585 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 TSPEARQ8WU66 669 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 RASSF5Q8WWW0 418 aa5.39□□□□□ -1.55
CHD2-227ENST00000637572 MRPL48Q96GC5 212 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms