RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 PROKR1Q8TCW9 393 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 DLG3Q92796 817 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 NDOR1Q9UHB4 597 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 SDR42E2A6NKP2 422 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 MAGP20916 626 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 PEBP1P30086 187 aaKnown RBP18.26■□□□□ 0.51
CLN6-221ENST00000637494 RRADP55042 308 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 DCDP81605 110 aaKnown RBP18.26■□□□□ 0.51
CLN6-221ENST00000637494 DHX34Q14147 1143 aaKnown RBP18.26■□□□□ 0.51
CLN6-221ENST00000637494 ZIC1Q15915 447 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 TYSND1Q2T9J0 566 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 MLIPQ5VWP3 458 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 LCN10Q6JVE6 187 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 TTC27Q6P3X3 843 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 FAM198BQ6UWH4 519 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 TAX1BP1Q86VP1 789 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 DNAJC22Q8N4W6 341 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 C2orf73Q8N5S3 287 aaPredicted RBP18.26■□□□□ 0.51
CLN6-221ENST00000637494 FLVCR1-AS1Q8TAF5 88 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 MS4A14Q96JA4 679 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 SLC25A23Q9BV35 468 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 SPRTNQ9H040 489 aaPredicted RBP18.26■□□□□ 0.51
CLN6-221ENST00000637494 ING2Q9H160 280 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 EPN3Q9H201 632 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 CCDC68Q9H2F9 335 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 IFT80Q9P2H3 777 aaPredicted RBP18.26■□□□□ 0.51
CLN6-221ENST00000637494 CIDEBQ9UHD4 219 aa18.26■□□□□ 0.51
CLN6-221ENST00000637494 CTAGE9A4FU28 777 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 GOLGA8KD6RF30 607 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 GOLGA8TH3BQL2 631 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 KIF5CO60282 957 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 AVILO75366 819 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 TMEM63AO94886 807 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 CCL11P51671 97 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 PGDP52209 483 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 ARSFP54793 590 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 ADARP55265 1226 aaKnown RBP18.25■□□□□ 0.51
CLN6-221ENST00000637494 C1orf189Q5VU69 101 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 NEPROQ6NW34 567 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 CNSTQ6PJW8 725 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 ZNF655Q8N720 491 aaPredicted RBP18.25■□□□□ 0.51
CLN6-221ENST00000637494 LINC01555Q8NAE3 123 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 MCUQ8NE86 351 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 LPGAT1Q92604 370 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 ZNF669Q96BR6 464 aaPredicted RBP18.25■□□□□ 0.51
CLN6-221ENST00000637494 IP6K3Q96PC2 410 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 IL17FQ96PD4 163 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 INTS10Q9NVR2 710 aaKnown RBP18.25■□□□□ 0.51
CLN6-221ENST00000637494 EURLQ9NYK6 297 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 CRYL1Q9Y2S2 319 aa18.25■□□□□ 0.51
CLN6-221ENST00000637494 HELZ2Q9BYK8 2649 aaKnown RBP18.25■□□□□ 0.51
CLN6-221ENST00000637494 FAM237BA0A1B0GVD1 139 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 DNAJB5O75953 348 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 C1orf105O95561 183 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 ARNTP27540 789 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 ATP5DP30049 168 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 FOLR3P41439 243 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 PTGIRP43119 386 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 BDKRB1P46663 353 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 GABRA4P48169 554 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 NAA25Q14CX7 972 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 CYP1B1Q16678 543 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 TTLL9Q3SXZ7 439 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 CTSL3PQ5NE16 218 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 MED25Q71SY5 747 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 MCATQ8IVS2 390 aaKnown RBP18.24■□□□□ 0.51
CLN6-221ENST00000637494 ZBTB2Q8N680 514 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 TMEM102Q8N9M5 508 aaPredicted RBP18.24■□□□□ 0.51
CLN6-221ENST00000637494 GABPB2Q8TAK5 448 aaPredicted RBP18.24■□□□□ 0.51
CLN6-221ENST00000637494 BIRC8Q96P09 236 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 OSBPL9Q96SU4 736 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 TRIM55Q9BYV6 548 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 GRPEL1Q9HAV7 217 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 FAM114A2Q9NRY5 505 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 SPATA7Q9P0W8 599 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 PCDHGA9Q9Y5G4 932 aaKnown RBP18.24■□□□□ 0.51
CLN6-221ENST00000637494 NFS1Q9Y697 457 aa18.24■□□□□ 0.51
CLN6-221ENST00000637494 GOLGA8MH3BSY2 632 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 PHF2O75151 1096 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 NIPSNAP2O75323 286 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 IGHEP01854 428 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 CAPN1P07384 714 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 ATXN8OSP0DMR3 200 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 CBSLP0DN79 551 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 PIM1P11309 404 aaPredicted RBP18.23■□□□□ 0.51
CLN6-221ENST00000637494 PKMP14618 531 aaKnown RBP18.23■□□□□ 0.51
CLN6-221ENST00000637494 NR1D1P20393 614 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 ALAS2P22557 587 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 CBSP35520 551 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 FNTAP49354 379 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 CHAF1BQ13112 559 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 GRB7Q14451 532 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 PPP1R7Q15435 360 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 ANKRD20A4Q4UJ75 823 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 TCTE1Q5JU00 501 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 ANKRD22Q5VYY1 191 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 ZNF385CQ66K41 422 aaPredicted RBP18.23■□□□□ 0.51
CLN6-221ENST00000637494 CPZQ66K79 652 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 ZNF470Q6ECI4 717 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 FIGLAQ6QHK4 219 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms