RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CA5BQ9Y2D0 317 aa14.92□□□□□ -0.02
CLN6-219ENST00000637329 ZFC3H1O60293 1989 aaKnown RBP14.92□□□□□ -0.02
CLN6-219ENST00000637329 RIF1Q5UIP0 2472 aaKnown RBP14.91□□□□□ -0.02
CLN6-219ENST00000637329 CACNA1HO95180 2353 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 SPTY2D1-AS1A0A0U1RR47 76 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 PPP6CO00743 305 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 KDM1AO60341 852 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 HNRNPCL1O60812 293 aaKnown RBP14.91□□□□□ -0.02
CLN6-219ENST00000637329 UBOX5O94941 541 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 OR4F21O95013 312 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 JUNP05412 331 aaKnown RBP14.91□□□□□ -0.02
CLN6-219ENST00000637329 THEGLP0DJG4 465 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 HGFP14210 728 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 AOC1P19801 751 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 EPHA3P29320 983 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 HALP42357 657 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 GDF5P43026 501 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 ERVPABLB-1P60509 514 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 ALG11Q2TAA5 492 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 UAP1L1Q3KQV9 507 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 XKR7Q5GH72 579 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 TPRG1LQ5T0D9 272 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 CAPN13Q6MZZ7 669 aaPredicted RBP14.91□□□□□ -0.02
CLN6-219ENST00000637329 LPCAT2Q7L5N7 544 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 DGLUCYQ7Z3D6 616 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 MILR1Q7Z6M3 343 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 PARGQ86W56 976 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 RAB42Q8N4Z0 105 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 FAM160A2Q8N612 972 aaPredicted RBP14.91□□□□□ -0.02
CLN6-219ENST00000637329 SNX31Q8N9S9 440 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 OR4F6Q8NGB9 312 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 ZNF480Q8WV37 535 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 OR52B2Q96RD2 323 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 SGPP1Q9BX95 441 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 MVB12BQ9H7P6 319 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 SLC12A4Q9UP95 1085 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 FIS1Q9Y3D6 152 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 KMT2EQ8IZD2 1858 aa14.91□□□□□ -0.02
CLN6-219ENST00000637329 A0A1B0GTL3 188 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 MEI4A8MW99 385 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 PIP5K1BO14986 540 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 ATP5HO75947 161 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 RASGRP1O95267 797 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 CLDN9O95484 217 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 EPORP19235 508 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 NDUFS1P28331 727 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 PRDX3P30048 256 aaKnown RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 HMOX2P30519 316 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 ADSLP30566 484 aaPredicted RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 ARL1P40616 181 aaPredicted RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 PXNP49023 591 aaPredicted RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 BLKP51451 505 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 PNLIPRP1P54315 467 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 FOXA1P55317 472 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 TBPL1P62380 186 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 RACK1P63244 317 aaKnown RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 RPL6Q02878 288 aaKnown RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 ZNF33BQ06732 778 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 ILF3Q12906 894 aaKnown RBP eCLIP14.9□□□□□ -0.02
CLN6-219ENST00000637329 BNIP1Q12981 228 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 KRT72Q14CN4 511 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 ZXDCQ2QGD7 858 aaPredicted RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 LSM12Q3MHD2 195 aaKnown RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 CCSMST1Q4G0I0 132 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 ABRAXAS1Q6UWZ7 409 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 C11orf74Q86VG3 221 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 THOC6Q86W42 341 aaKnown RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 SYTL1Q8IYJ3 562 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 L3MBTL4Q8NA19 623 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 MFSD2AQ8NA29 543 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 SPDYE1Q8NFV5 336 aaPredicted RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 OR5AR1Q8NGP9 310 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 C12orf66Q96MD2 445 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 KCNA7Q96RP8 456 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 TUBB6Q9BUF5 446 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 ACTR8Q9H981 624 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 ACTR5Q9H9F9 607 aaPredicted RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 CCDC177Q9NQR7 707 aaPredicted RBP14.9□□□□□ -0.02
CLN6-219ENST00000637329 TXLNGQ9NUQ3 528 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 RIC8BQ9NVN3 520 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 PSMD13Q9UNM6 376 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 FAM186AA6NE01 2351 aa14.9□□□□□ -0.02
CLN6-219ENST00000637329 PDZK1P1A8MUH7 402 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 TNFP01375 233 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 CAPN1P07384 714 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 MTHFD1P11586 935 aaKnown RBP14.89□□□□□ -0.03
CLN6-219ENST00000637329 NAE1Q13564 534 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 E2F2Q14209 437 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 GRB7Q14451 532 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 CYP2A13Q16696 494 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 LIPJQ5W064 366 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 DDIASQ8IXT1 998 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 LRRC56Q8IYG6 542 aaPredicted RBP14.89□□□□□ -0.03
CLN6-219ENST00000637329 FRMD1Q8N878 549 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 CDYL2Q8N8U2 506 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 HMGCLL1Q8TB92 370 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 METTL6Q8TCB7 284 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 MED8Q96G25 268 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 KLHDC7BQ96G42 594 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 SLC6A18Q96N87 628 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms