RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 CDKN2AIPNLQ96HQ2 116 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 HBEGFQ99075 208 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 SAMD4AQ9UPU9 718 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 CARD8Q9Y2G2 431 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 EPOP01588 193 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 DNAJA1P31689 397 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 MLLT6P55198 1093 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 IL2P60568 153 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 TBCEQ15813 527 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 DDR2Q16832 855 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 TIGD6Q17RP2 521 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 UBXN11Q5T124 520 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 UBQLNLQ8IYU4 475 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 MROH8Q9H579 483 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 RETREG1Q9H6L5 497 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 RASSF1Q9NS23 344 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 TRMT6Q9UJA5 497 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 GRIP1Q9Y3R0 1128 aa15.22■□□□□ 0.03
CACNA1A-235ENST00000637004 MYO1GB0I1T2 1018 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 DSCR3O14972 297 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 MYCP01106 439 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 FPR1P21462 350 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 HK3P52790 923 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 RPL38P63173 70 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 CARD16Q5EG05 197 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 CALHM3Q86XJ0 350 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 P3H2Q8IVL5 708 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 RAVER1Q8IY67 606 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 COPS4Q9BT78 406 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 ITM2CQ9NQX7 267 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 KRT84Q9NSB2 600 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 KIF17Q9P2E2 1029 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 VPS9D1Q9Y2B5 631 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 ASB1Q9Y576 335 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 TNPO3Q9Y5L0 923 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 NYNRINQ9P2P1 1898 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 PTGESO14684 152 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 ERN1O75460 977 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 TPPPO94811 219 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 IGFBP6P24592 240 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 ETV6P41212 452 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 CLCNKBP51801 687 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 GNG2P59768 71 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 PTGR1Q14914 329 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 PTPRNQ16849 979 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 SMU1Q2TAY7 513 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 FAM209AQ5JX71 171 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 SPANXN4Q5MJ08 99 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 SPATC1Q76KD6 591 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 CEP68Q76N32 757 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 PHACTR4Q8IZ21 702 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 TRIM63Q969Q1 353 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 BARD1Q99728 777 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 CCDC32Q9BV29 185 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 FBXL12Q9NXK8 326 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 HECAQ9UBI9 543 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 BTBD3Q9Y2F9 522 aa15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 TMA7Q9Y2S6 64 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-235ENST00000637004 RGS14O43566 566 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 HAPLN1P10915 354 aaPredicted RBP15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 RHOQP17081 205 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 PRKCAP17252 672 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 MZF1P28698 734 aaPredicted RBP15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 LAPTM4AQ15012 233 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 FBXO43Q4G163 708 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 CACHD1Q5VU97 1274 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 AFTPHQ6ULP2 937 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 MYDGFQ969H8 173 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 PSMG2Q969U7 264 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 C1orf74Q96LT6 269 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 OR52E6Q96RD3 313 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 PITX2Q99697 317 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 SEMA3CQ99985 751 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 IL1RAPQ9NPH3 570 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 TRMT13Q9NUP7 481 aaKnown RBP15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 NUDT4Q9NZJ9 180 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 CAB39Q9Y376 341 aaPredicted RBP15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 LYVE1Q9Y5Y7 322 aa15.21■□□□□ 0.02
CACNA1A-235ENST00000637004 M0R082 166 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 PER2O15055 1255 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 MUSKO15146 869 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 WBP4O75554 376 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 TSPAN12O95859 305 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 OTCP00480 354 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 DDOSTP39656 456 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 SLC15A1P46059 708 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 STARD3Q14849 445 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 ABRAXAS2Q15018 415 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 SLC46A3Q7Z3Q1 461 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 GATAD2AQ86YP4 633 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 GALNT12Q8IXK2 581 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 OR4F6Q8NGB9 312 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 LINGO1Q96FE5 620 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 POLR1EQ9GZS1 481 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 PDP1Q9P0J1 537 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 TRBV5-3A0A0A0MS03 114 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 ARVCFO00192 962 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 CCNDBP1O95273 360 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 PRSS56P0CW18 603 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 CTGFP29279 349 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms