RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SERPINA13PQ6UXR4 307 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 MACC1Q6ZN28 852 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 SYVN1Q86TM6 617 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 CLVS1Q8IUQ0 354 aaPredicted RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 BEND7Q8N7W2 519 aaPredicted RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 FBXL8Q96CD0 374 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 RCN3Q96D15 328 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 PLA2G2FQ9BZM2 168 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 SEMA6AQ9H2E6 1030 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 ZNF385DQ9H6B1 395 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 COQ10BQ9H8M1 238 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 AKTIPQ9H8T0 292 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 PKD2L2Q9NZM6 624 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 CCDC167Q9P0B6 97 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 THEGQ9P2T0 379 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 GON4LQ3T8J9 2241 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 TBC1D3BA6NDS4 549 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 TRIM64A6NGJ6 449 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 TRIM64BA6NI03 449 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 PCP4L1A6NKN8 68 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 AGAP14A8MT82 685 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 M0QX08 132 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 NFATC1O95644 943 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 DGKAP23743 735 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 CCR7P32248 378 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 EVI2BP34910 448 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 RGS4P49798 205 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 CYP2A13Q16696 494 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 SIGIRRQ6IA17 410 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 PARS2Q7L3T8 475 aaKnown RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 CACUL1Q86Y37 369 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 CPSF7Q8N684 471 aaKnown RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 OR9I1Q8NGQ6 314 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 SLC45A3Q96JT2 553 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 HBEGFQ99075 208 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 NPAS2Q99743 824 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 EGFL8Q99944 293 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 FAM83CQ9BQN1 747 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 CDH7Q9ULB5 785 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 KRT87PA6NCN2 255 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 OR2AG2A6NM03 316 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 CFLARO15519 480 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 FFAR2O15552 330 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 KLK8O60259 260 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 SULT1C4O75897 302 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 OR4F21O95013 312 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 CYP2A6P11509 494 aaPredicted RBP11.24□□□□□ -0.61
CLN6-217ENST00000636964 HAAOP46952 286 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 HSPA7P48741 367 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 BOP1Q14137 746 aaKnown RBP11.24□□□□□ -0.61
CLN6-217ENST00000636964 FLOT2Q14254 428 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 GRB7Q14451 532 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 FGD3Q5JSP0 725 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 IL23RQ5VWK5 629 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 VITQ6UXI7 678 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 LARP4Q71RC2 724 aaKnown RBP eCLIP11.24□□□□□ -0.614e-6■□□□□ 9.4
CLN6-217ENST00000636964 PELI3Q8N2H9 469 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 CDYL2Q8N8U2 506 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 FAM110BQ8TC76 370 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 ZNF597Q96LX8 424 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 CDRT15Q96T59 188 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 RTKNQ9BST9 563 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 NOL11Q9H8H0 719 aaKnown RBP11.24□□□□□ -0.61
CLN6-217ENST00000636964 SPTBN5Q9NRC6 3674 aaKnown RBP11.24□□□□□ -0.61
CLN6-217ENST00000636964 MYO15AQ9UKN7 3530 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 C9JVG2 144 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 E2F3O00716 465 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 ACOT8O14734 319 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 SRPRAP08240 638 aaKnown RBP11.24□□□□□ -0.61
CLN6-217ENST00000636964 POU2F2P09086 479 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 ATXN8OSP0DMR3 200 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 LAPTM5Q13571 262 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 ACOX1Q15067 660 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 AGKQ53H12 422 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 TMEM126BQ8IUX1 230 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 HMGCLL1Q8TB92 370 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 TUBGCP3Q96CW5 907 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 PDLIM5Q96HC4 596 aaKnown RBP11.24□□□□□ -0.61
CLN6-217ENST00000636964 KXD1Q9BQD3 176 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 RPF2Q9H7B2 306 aaKnown RBP11.24□□□□□ -0.61
CLN6-217ENST00000636964 ZFP14Q9HCL3 533 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 MSRAQ9UJ68 235 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 ATG2BQ96BY7 2078 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 A0A1W2PPW3 197 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 FADS2P1A8MWK0 482 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 STX16O14662 325 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 HAT1O14929 419 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 INPP4BO15327 924 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 FGF4P08620 206 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 ALDOCP09972 364 aaKnown RBP11.24□□□□□ -0.61
CLN6-217ENST00000636964 CHRNB1P11230 501 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 ENO3P13929 434 aaPredicted RBP11.24□□□□□ -0.61
CLN6-217ENST00000636964 FCARP24071 287 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 RCVRNP35243 200 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 NUP107P57740 925 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 RPS3AP61247 264 aaKnown RBP11.24□□□□□ -0.61
CLN6-217ENST00000636964 KANK2Q63ZY3 851 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 SYCE2Q6PIF2 218 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 GPR149Q86SP6 731 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 ADAMTSL2Q86TH1 951 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms