RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ZFRQ96KR1 1074 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 BARD1Q99728 777 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 CORO1CQ9ULV4 474 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 FADS2P1A8MWK0 482 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 BST1Q10588 318 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 Q6ZVU0 165 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 ZNF676Q8N7Q3 588 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 C12orf76Q8N812 135 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 TRPV1Q8NER1 839 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 SLC7A6OSQ96CW6 309 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 TMEM168Q9H0V1 697 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 SLC17A6Q9P2U8 582 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 MFHAS1Q9Y4C4 1052 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 AP1M2Q9Y6Q5 423 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 MEGF6O75095 1541 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 TCRBV5S4A2TA0A5A2 114 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 E7ENX8 843 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 SCO2O43819 266 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 KLF8O95600 359 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 PKMP14618 531 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 MTPNP58546 118 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 KCNC4Q03721 635 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 E2F2Q14209 437 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 SGCAQ16586 387 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 GNG8Q9UK08 70 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 FAM240BA0A1B0GVZ2 78 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 SLC25A52Q3SY17 297 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 ADNP2Q6IQ32 1131 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 PDE12Q6L8Q7 609 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 VASH1Q7L8A9 365 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 NINJ1Q92982 152 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 CRTAC1Q9NQ79 661 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 HEMK1Q9Y5R4 338 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 ITSN1Q15811 1721 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 SMIM28A0A1B0GU29 152 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 ERI3O43414 337 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 RNF13O43567 381 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 ALADP13716 330 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 KIR3DL1P43629 444 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 USP30Q70CQ3 517 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 USP53Q70EK8 1073 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 TRIM74Q86UV6 250 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 TCEAL3Q969E4 200 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 SHDQ96IW2 340 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 UNC93B1Q9H1C4 597 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 USP29Q9HBJ7 922 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 FBRSL1Q9HCM7 1045 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 SDHAF3Q9NRP4 125 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 DAPL1A0PJW8 107 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 M0R2N6 131 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 BRINP1O60477 761 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 PGRP06401 933 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 EPYCQ99645 322 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 TPSD1Q9BZJ3 242 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 C14orf105Q9NVL8 296 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 GLS2Q9UI32 602 aa17.5■□□□□ 0.39
CACNA1A-227ENST00000636549 J3QLW9 94 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 ZNF19P17023 458 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 LBX1P52954 281 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 RAB8AP61006 207 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 GNA12Q03113 381 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 GRM3Q14832 879 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 THOC7Q6I9Y2 204 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 FIP1L1Q6UN15 594 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 PHC3Q8NDX5 983 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 TMEM161BQ8NDZ6 487 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 KBTBD8Q8NFY9 601 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 NXPE2Q96DL1 559 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 BTBD1Q9H0C5 482 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 OR2AT4A6NND4 320 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 CRTC2Q53ET0 693 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 OR8K5Q8NH50 307 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 EPS8L1Q8TE68 723 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 ORAI3Q9BRQ5 295 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 STRADBQ9C0K7 418 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 SLC6A15Q9H2J7 730 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 MIOSQ9NXC5 875 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 MRPL3P09001 348 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 GRPRP30550 384 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 VIPR1P32241 457 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 CLCA4Q14CN2 919 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 ECM1Q16610 540 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 TMED4Q7Z7H5 227 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 TOP6BLQ8N6T0 577 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 FUT8Q9BYC5 575 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 NIFKQ9BYG3 293 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 ASTN1O14525 1302 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 USP2O75604 605 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 COMTD1Q86VU5 262 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 TEX19Q8NA77 164 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 OR8H1Q8NGG4 311 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 OR2L2Q8NH16 312 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 AGAP2Q99490 1192 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 SNX7Q9UNH6 387 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 ENTPD5O75356 428 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 CST3P01034 146 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 MAGEA2P43356 314 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 MEF2AQ02078 507 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 ZNF527Q8NB42 609 aa17.49■□□□□ 0.39
CACNA1A-227ENST00000636549 ANKZF1Q9H8Y5 726 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms