RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 OGFRQ9NZT2 677 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ABI3Q9P2A4 366 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 KLHL9Q9P2J3 617 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ADD3Q9UEY8 706 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 FBXL17Q9UF56 701 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 PADI3Q9ULW8 664 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 YIPF1Q9Y548 306 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 TCHHQ07283 1943 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MYH11P35749 1972 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 EML5Q05BV3 1969 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF638Q14966 1978 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 RALGAPA1Q6GYQ0 2036 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 PALLDQ8WX93 1383 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 NCAPD2Q15021 1401 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 KIAA0100Q14667 2235 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 PLXNA3P51805 1871 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 TDRD15B5MCY1 1934 aaKnown RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 CEP192Q8TEP8 1941 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 A0A087X0M5 115 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 A0A0G2JNG1 304 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 ZCWPW2A0A1B0GU75 182 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 A0A1B0GX30 115 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 A0A1W2PQ09 198 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 A0A1W2PQF6 199 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 hCG_1807616A0A1W2PRN6 198 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 FRMD3A2A2Y4 597 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 ANKRD18BA2A2Z9 1011 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 A6NCN8 305 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 A6NL46 340 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 OR6C76A6NM76 312 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 HHLA1C9JL84 531 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 H0YIN7 160 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 MAP2K7O14733 419 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 SCAMP1O15126 338 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 VILLO15195 856 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 HCRTR2O43614 444 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 CTSVO60911 334 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF217O75362 1048 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 TSPAN9O75954 239 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 TMEM63AO94886 807 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 DDX58O95786 925 aaKnown RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 SCGB1D1O95968 90 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 BCL10O95999 233 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 H1F0P07305 194 aaKnown RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 HMBSP08397 361 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 VPREB1P12018 145 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF23P17027 643 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 ALOX12P18054 663 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 CDH2P19022 906 aaPredicted RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 UGT1A1P22309 533 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 DNASE1P24855 282 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 HRH2P25021 359 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 HOXA13P31271 388 aaPredicted RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 GABRA5P31644 462 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 MAP2K2P36507 400 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 SLC15A1P46059 708 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 FASLGP48023 281 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 ARCN1P48444 511 aaKnown RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 LMAN1P49257 510 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 GPR143P51810 404 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 CLNS1AP54105 237 aaKnown RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 BRWD1-AS2P59051 145 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 C1QTNF8P60827 252 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 PRKAA1Q13131 559 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 KIR2DS5Q14953 304 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 WTAPQ15007 396 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF876PQ49A33 203 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 GTDC1Q4AE62 458 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM98BQ52LJ0 330 aaKnown RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 WDR38Q5JTN6 314 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 FFAR4Q5NUL3 377 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 CFAP58Q5T655 872 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 SLC35E4Q6ICL7 350 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 KLC3Q6P597 504 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 CORO6Q6QEF8 472 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 TMCO3Q6UWJ1 677 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 PLXDC2Q6UX71 529 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 CLEC17AQ6ZS10 378 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 SH2D5Q6ZV89 423 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 NRROSQ86YC3 692 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM114A1Q8IWE2 563 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 HACE1Q8IYU2 909 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 ADGRF2Q8IZF7 708 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 RBM15BQ8NDT2 890 aaKnown RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 KBTBD8Q8NFY9 601 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM76AQ8TAV0 307 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 HCAR2Q8TDS4 363 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 DAZLQ92904 295 aaKnown RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 EVI5LQ96CN4 794 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 PPP1R13BQ96KQ4 1090 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 EGLN2Q96KS0 407 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 PAFAH2Q99487 392 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 CHCHD6Q9BRQ6 235 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 RHNO1Q9BSD3 238 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 C1QTNF1Q9BXJ1 281 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 TMX4Q9H1E5 349 aaPredicted RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 PDZD7Q9H5P4 517 aa1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 APOBEC3GQ9HC16 384 aaKnown RBP1.03□□□□□ -2.24
SMARCB1-209ENST00000635578 PAG1Q9NWQ8 432 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms