RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 RNF112Q9ULX5 631 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 COLEC10Q9Y6Z7 277 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 C4orf47A7E2U8 309 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 ARHGEF33A8MVX0 844 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 GFYI3L273 518 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 TRIM38O00635 465 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 SLC16A5O15375 505 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 NOBOXO60393 691 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 C1orf105O95561 183 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 RBP1P09455 135 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 HIST1H2AGP0C0S8 130 aaPredicted RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 ZNF883P0CG24 379 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 HIST1H2ADP20671 130 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 ETV4P43268 484 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 MAZP56270 477 aaKnown RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 SP140Q13342 867 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 KRT72Q14CN4 511 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 PHKG1Q16816 387 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 SBSNQ6UWP8 590 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 SLC9B2Q86UD5 537 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 GPSM1Q86YR5 675 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 KYQ8NBH2 561 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 OR4C6Q8NH72 309 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 OR5K2Q8NHB8 316 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 MCOLN3Q8TDD5 553 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 DLG3Q92796 817 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 HIST1H2AHQ96KK5 128 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 HIST1H2AJQ99878 128 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 H2AFJQ9BTM1 129 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 SLC12A9Q9BXP2 914 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 TRIM54Q9BYV2 358 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 MMADHCQ9H3L0 296 aaPredicted RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 MVB12BQ9H7P6 319 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 PARVBQ9HBI1 364 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 CPSF2Q9P2I0 782 aaKnown RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 XPR1Q9UBH6 696 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 CPNE7Q9UBL6 633 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 PDE10AQ9Y233 779 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 SPTBN4Q9H254 2564 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 ZFC3H1O60293 1989 aaKnown RBP14.04□□□□□ -0.16
LINC00339-208ENST00000634934 KRT87PA6NCN2 255 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 XRCC1P18887 633 aaPredicted RBP14.04□□□□□ -0.16
LINC00339-208ENST00000634934 NDUFS1P28331 727 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 PTPN4P29074 926 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 KCNC1P48547 511 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 CCSMST1Q4G0I0 132 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 C14orf28Q4W4Y0 310 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 TECRLQ5HYJ1 363 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.04□□□□□ -0.16
LINC00339-208ENST00000634934 STPG1Q5TH74 334 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 ZCCHC8Q6NZY4 707 aaKnown RBP14.04□□□□□ -0.16
LINC00339-208ENST00000634934 OGFOD3Q6PK18 319 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 DCUN1D3Q8IWE4 304 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 TBC1D21Q8IYX1 336 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 ARL14Q8N4G2 192 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 ARL10Q8N8L6 244 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 TCP10LQ8TDR4 215 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 ERP27Q96DN0 273 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 MRPL57Q9BQC6 102 aaKnown RBP14.04□□□□□ -0.16
LINC00339-208ENST00000634934 MRPL46Q9H2W6 279 aaKnown RBP14.04□□□□□ -0.16
LINC00339-208ENST00000634934 STN1Q9H668 368 aaKnown RBP14.04□□□□□ -0.16
LINC00339-208ENST00000634934 POT1Q9NUX5 634 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 SLC17A7Q9P2U7 560 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 PLAGL1Q9UM63 463 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 PCDHGB2Q9Y5G2 931 aa14.04□□□□□ -0.16
LINC00339-208ENST00000634934 SPEGQ15772 3267 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 ARHGEF17Q96PE2 2063 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-208ENST00000634934 NCF1BA6NI72 391 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-208ENST00000634934 NCF1CA8MVU1 366 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-208ENST00000634934 SUPT3HB4E1H0 165 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 TK2O00142 265 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 SIGLEC6O43699 453 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 KERAO60938 352 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 SUPT3HO75486 399 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 ANP32DO95626 131 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 GUCA1CO95843 209 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 ENO2P09104 434 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-208ENST00000634934 T-ENOLP0DO92 83 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 MYF5P13349 255 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 NCF1P14598 390 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-208ENST00000634934 RPIAP49247 311 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 UBE2IP63279 158 aaKnown RBP14.03□□□□□ -0.16
LINC00339-208ENST00000634934 HHEXQ03014 270 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 PPP1R3AQ16821 1122 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 RSPO4Q2I0M5 234 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-208ENST00000634934 INAVAQ3KP66 663 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 CCDC153Q494R4 210 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 RASGRP3Q8IV61 690 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 SLC35F3Q8IY50 421 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 GPR156Q8NFN8 814 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 RHEBL1Q8TAI7 183 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 SETD7Q8WTS6 366 aaKnown RBP14.03□□□□□ -0.16
LINC00339-208ENST00000634934 JPH3Q8WXH2 748 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-208ENST00000634934 UTP4Q969X6 686 aaKnown RBP14.03□□□□□ -0.16
LINC00339-208ENST00000634934 RAD51AP1Q96B01 352 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 SLC7A6OSQ96CW6 309 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-208ENST00000634934 CAMK1GQ96NX5 476 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 FAM111AQ96PZ2 611 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 EGFL8Q99944 293 aa14.03□□□□□ -0.16
LINC00339-208ENST00000634934 MLXIPLQ9NP71 852 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms