RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 CDYL2Q8N8U2 506 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 TMIEQ8NEW7 156 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 OR8D1Q8WZ84 308 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 RHBDF1Q96CC6 855 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ZNF845Q96IR2 970 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 PPP3R2Q96LZ3 170 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 CCDC138Q96M89 665 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 NTMT1Q9BV86 223 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 SLC12A9Q9BXP2 914 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 PARVBQ9HBI1 364 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 FBRSL1Q9HCM7 1045 aaKnown RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 BATF3Q9NR55 127 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 AIG1Q9NVV5 245 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 DOCK6Q96HP0 2047 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ZNF106Q9H2Y7 1883 aaKnown RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 MYOFQ9NZM1 2061 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 H0Y858 1186 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 RGS14O43566 566 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 SYNCRIPO60506 623 aaKnown RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 TULP3O75386 442 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 SLC22A3O75751 556 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 NPPAP01160 153 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 CAPN1P07384 714 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 RPSAP08865 295 aaKnown RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ELFN1P0C7U0 828 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 EBLN1P0CF75 366 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 GGT5P36269 586 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 HSPA7P48741 367 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 RPIAP49247 311 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 CCR3P51677 355 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 THOP1P52888 689 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 AP1S2P56377 157 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 KCNK10P57789 538 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 B4GALNT1Q00973 533 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 SEMG2Q02383 582 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 EMX2Q04743 252 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ELP6Q0PNE2 266 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 FNDC3BQ53EP0 1204 aaKnown RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 FBXO48Q5FWF7 155 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 TLDC1Q6P9B6 456 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 TMC5Q6UXY8 1006 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 UBE2R2Q712K3 238 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 TMEM126BQ8IUX1 230 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 GJD3Q8N144 294 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 DDHD1Q8NEL9 900 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 HMGCLL1Q8TB92 370 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 MCOLN3Q8TDD5 553 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ASZ1Q8WWH4 475 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 SORCS1Q8WY21 1168 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ASB9Q96DX5 294 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 PPP1R16AQ96I34 528 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 VPS35Q96QK1 796 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 LGR4Q9BXB1 951 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 SLC29A3Q9BZD2 475 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 NSUN3Q9H649 340 aaKnown RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 LIN28AQ9H9Z2 209 aaKnown RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 TRPV4Q9HBA0 871 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 DDX18Q9NVP1 670 aaKnown RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 NMRK1Q9NWW6 199 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 TRPS1Q9UHF7 1281 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ZNF225Q9UK10 706 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 PCDHGA7Q9Y5G6 932 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 GPR45Q9Y5Y3 372 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 NOTCH4Q99466 2003 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 NR5A2O00482 541 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 FBP2O00757 339 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 OR7A17O14581 309 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 TAPBPO15533 448 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 RHCEP18577 417 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 PRDX3P30048 256 aaKnown RBP6.98□□□□□ -1.29
BRCA1-230ENST00000634433 CCR7P32248 378 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 VIPR2P41587 438 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 NRIP1P48552 1158 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 RHDQ02161 417 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 CEACAM7Q14002 265 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 KCNC3Q14003 757 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 TRIM25Q14258 630 aaKnown RBP6.98□□□□□ -1.29
BRCA1-230ENST00000634433 FAM78AQ5JUQ0 283 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 HENMT1Q5T8I9 393 aaKnown RBP6.98□□□□□ -1.29
BRCA1-230ENST00000634433 LETMD1Q6P1Q0 360 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 BLOC1S3Q6QNY0 202 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 IL27RAQ6UWB1 636 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 NUDT18Q6ZVK8 323 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 LRRC70Q7Z2Q7 622 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 HSD11B1LQ7Z5J1 315 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 TECPR1Q7Z6L1 1165 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 DSG4Q86SJ6 1040 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 DHDDSQ86SQ9 333 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 FUNDC1Q8IVP5 155 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 ETFBKMTQ8IXQ9 262 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 ZNF619Q8N2I2 560 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 MINDY1Q8N5J2 469 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 FNDC5Q8NAU1 212 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 OR4F6Q8NGB9 312 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 OR52B6Q8NGF0 335 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 BTN2A2Q8WVV5 523 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 PYDC1Q8WXC3 89 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 ASB11Q8WXH4 323 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 ESAMQ96AP7 390 aa6.98□□□□□ -1.29
BRCA1-230ENST00000634433 LRRC3BQ96PB8 259 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms