RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 IQCB1Q15051 598 aa19.31■□□□□ 0.68
TARDBP-228ENST00000629725 ZNF630Q2M218 657 aaPredicted RBP19.31■□□□□ 0.68
TARDBP-228ENST00000629725 VWA2Q5GFL6 755 aa19.31■□□□□ 0.68
TARDBP-228ENST00000629725 GFRALQ6UXV0 394 aa19.31■□□□□ 0.68
TARDBP-228ENST00000629725 COX15Q7KZN9 410 aa19.31■□□□□ 0.68
TARDBP-228ENST00000629725 SERPINA9Q86WD7 417 aa19.31■□□□□ 0.68
TARDBP-228ENST00000629725 MCATQ8IVS2 390 aaKnown RBP19.31■□□□□ 0.68
TARDBP-228ENST00000629725 ZNF808Q8N4W9 903 aaPredicted RBP19.31■□□□□ 0.68
TARDBP-228ENST00000629725 OR5K2Q8NHB8 316 aa19.31■□□□□ 0.68
TARDBP-228ENST00000629725 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.31■□□□□ 0.68
TARDBP-228ENST00000629725 ANP32EQ9BTT0 268 aa19.31■□□□□ 0.68
TARDBP-228ENST00000629725 PLAGL1Q9UM63 463 aa19.31■□□□□ 0.68
TARDBP-228ENST00000629725 AAR2Q9Y312 384 aaKnown RBP19.31■□□□□ 0.68
TARDBP-228ENST00000629725 TRBV5-4A0A0C4DH59 114 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 DYTNA2CJ06 578 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 DSCR3O14972 297 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 SPOPO43791 374 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 KDM1AO60341 852 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 MAGP20916 626 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 ACADLP28330 430 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 PEBP1P30086 187 aaKnown RBP19.3■□□□□ 0.68
TARDBP-228ENST00000629725 BRD3Q15059 726 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 INAQ16352 499 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 ASTE1Q2TB18 679 aaPredicted RBP19.3■□□□□ 0.68
TARDBP-228ENST00000629725 TFDP3Q5H9I0 405 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 ITPRIPL1Q6GPH6 555 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 MTFR2Q6P444 385 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 TMEM207Q6UWW9 146 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 TAS2R42Q7RTR8 314 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 FAM20CQ8IXL6 584 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 TAAR6Q96RI8 345 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 CUTCQ9NTM9 273 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 CTSFQ9UBX1 484 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 KLHL20Q9Y2M5 609 aa19.3■□□□□ 0.68
TARDBP-228ENST00000629725 CCL21O00585 134 aa19.29■□□□□ 0.68
TARDBP-228ENST00000629725 AP2A2O94973 939 aa19.29■□□□□ 0.68
TARDBP-228ENST00000629725 COMTP21964 271 aa19.29■□□□□ 0.68
TARDBP-228ENST00000629725 YOD1Q5VVQ6 348 aaPredicted RBP19.29■□□□□ 0.68
TARDBP-228ENST00000629725 TRIM8Q9BZR9 551 aa19.29■□□□□ 0.68
TARDBP-228ENST00000629725 PCNX1Q96RV3 2341 aa19.29■□□□□ 0.68
TARDBP-228ENST00000629725 TRAV17A0A0B4J275 112 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 AKR1B10O60218 316 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 AP2A1O95782 977 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 HPP00738 406 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 PRSS56P0CW18 603 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 RBL1P28749 1068 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 OR1D4P47884 311 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 TNFSF10P50591 281 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 TPM4P67936 248 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 PRPSAP1Q14558 356 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 GRM7Q14831 915 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 RPTNQ6XPR3 784 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 ELMO1Q92556 727 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 DNAJC1Q96KC8 554 aaKnown RBP19.28■□□□□ 0.68
TARDBP-228ENST00000629725 CRB3Q9BUF7 120 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 C10orf88Q9H8K7 445 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 ZNF160Q9HCG1 818 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 SMARCAL1Q9NZC9 954 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 IL1RAPL1Q9NZN1 696 aa19.28■□□□□ 0.68
TARDBP-228ENST00000629725 hCG_1818297A0A087WSY0 165 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 VSTM2BA6NLU5 285 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 H7C0S8 307 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 PSTPIP1O43586 416 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 UNC5CO95185 931 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 ACPPP15309 386 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 MCM3P25205 808 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 PSMB4P28070 264 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 CARSP49589 748 aaKnown RBP19.27■□□□□ 0.68
TARDBP-228ENST00000629725 ZC3H12BQ5HYM0 836 aaKnown RBP19.27■□□□□ 0.68
TARDBP-228ENST00000629725 TCTE1Q5JU00 501 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 MICALCLQ6ZW33 695 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 TMTC1Q8IUR5 882 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 KBTBD2Q8IY47 623 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 METTL27Q8N6F8 245 aaPredicted RBP19.27■□□□□ 0.68
TARDBP-228ENST00000629725 CCDC110Q8TBZ0 833 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 MESP1Q9BRJ9 268 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 PLA2G3Q9NZ20 509 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 PTGFRNQ9P2B2 879 aa19.27■□□□□ 0.68
TARDBP-228ENST00000629725 H7C0C1 242 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 QSOX1O00391 747 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 MAP2K7O14733 419 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 USP1O94782 785 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 FTH1P02794 183 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 GRIA3P42263 894 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 NSG1P42857 185 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 CA7P43166 264 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 ATP5OP48047 213 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 RAB28P51157 221 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 PLOD1Q02809 727 aaPredicted RBP19.26■□□□□ 0.67
TARDBP-228ENST00000629725 KLC1Q07866 573 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 DBN1Q16643 649 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.26■□□□□ 0.673e-6■■■■□ 22.6
TARDBP-228ENST00000629725 FAM214AQ32MH5 1076 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 SYTL3Q4VX76 610 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 DENND5AQ6IQ26 1287 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 NAPRTQ6XQN6 538 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 NLRP9Q7RTR0 991 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 PIANPQ8IYJ0 282 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 TTC29Q8NA56 475 aaPredicted RBP19.26■□□□□ 0.67
TARDBP-228ENST00000629725 HAS2Q92819 552 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms