RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 NUF2Q9BZD4 464 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 GAREM1Q9H706 876 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 WDR26Q9H7D7 661 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TM7SF3Q9NS93 570 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 ARMCX1Q9P291 453 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 FAM8A1Q9UBU6 413 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 GPR34Q9UPC5 381 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TMEM98Q9Y2Y6 226 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 GPSM3Q9Y4H4 160 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 OR1A2Q9Y585 309 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 BAHCC1Q9P281 2608 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 CACNA1EQ15878 2313 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 GOLGA8QA0A0J9YX86 632 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 GOLGA8OA6NCC3 632 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 GOLGA8NF8WBI6 632 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SDHDO14521 159 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SLC16A5O15375 505 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 CCDC22O60826 627 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 PSIP1O75475 530 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 CBX6O95503 412 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 MLYCDO95822 493 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 FGF4P08620 206 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 ANXA5P08758 320 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 GSTM1P09488 218 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 HIST1H2AGP0C0S8 130 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 CD1EP15812 388 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 EPORP19235 508 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 HIST1H2ADP20671 130 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 CYP2A7P20853 494 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 EPHA3P29320 983 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 PBLDP30039 288 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 GDF5P43026 501 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SCTRP47872 440 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 RPIAP49247 311 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 NCALDP61601 193 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 GSTM4Q03013 218 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 BTKQ06187 659 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 LCP2Q13094 533 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 TEAD4Q15561 434 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 PDCD2Q16342 344 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SPDYAQ5MJ70 313 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SULT1C3Q6IMI6 304 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 FAM83HQ6ZRV2 1179 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SYVN1Q86TM6 617 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 FAM124AQ86V42 546 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SLC22A15Q8IZD6 547 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 OR52B6Q8NGF0 335 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 UBTD2Q8WUN7 234 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 STON2Q8WXE9 905 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 GLMNQ92990 594 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 HIST1H2AHQ96KK5 128 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 HIST1H2AJQ99878 128 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 H2AFJQ9BTM1 129 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 CCDC106Q9BWC9 280 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SLC17A9Q9BYT1 436 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 MIR1-1HGQ9H1L0 117 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 TUBB1Q9H4B7 451 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 FZD3Q9NPG1 666 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SEMA4BQ9NPR2 832 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 WWOXQ9NZC7 414 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SLC23A2Q9UGH3 650 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 BOLA1Q9Y3E2 137 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 PRKAB1Q9Y478 270 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 DNAJC15Q9Y5T4 150 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 PTGDR2Q9Y5Y4 395 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 AKAP13Q12802 2813 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 ADAMTS20P59510 1910 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 C17orf113A0A1B0GUU1 675 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 TRPC5OSA6NMA1 111 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 OR7A17O14581 309 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 LIN7AO14910 233 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 DFNA5O60443 496 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SERPINA6P08185 405 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 MAT2AP31153 395 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 MAPK9P45984 424 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 HSPA7P48741 367 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 INHBCP55103 352 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 PLOD1Q02809 727 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 UBAP2LQ14157 1087 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 HLA-BQ31612 363 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 LSM12Q3MHD2 195 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 CCSMST1Q4G0I0 132 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 CDKL4Q5MAI5 379 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 KANK2Q63ZY3 851 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 DOK6Q6PKX4 331 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 ACAD11Q709F0 780 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 PKD1L2Q7Z442 2459 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SLCO6A1Q86UG4 719 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 CLYBLQ8N0X4 340 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 OR56A4Q8NGH8 313 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 RHBDD1Q8TEB9 315 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 C3orf30Q96M34 536 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 FOPNLQ96NB1 174 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 HGH1Q9BTY7 390 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 BTBD1Q9H0C5 482 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 ZNF385DQ9H6B1 395 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 ACTR5Q9H9F9 607 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 MEAF6Q9HAF1 191 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 PARVBQ9HBI1 364 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms