RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 SERTM1A2A2V5 107 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 RSL1D1O76021 490 aaKnown RBP19.13■□□□□ 0.65
TREX1-205ENST00000625293 APODP05090 189 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 SLC2A4P14672 509 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 PDHA2P29803 388 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 GNPDA1P46926 289 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 MAD2L1Q13257 205 aaPredicted RBP19.13■□□□□ 0.65
TREX1-205ENST00000625293 CPSF6Q16630 551 aaKnown RBP eCLIP19.13■□□□□ 0.65
TREX1-205ENST00000625293 SPATS1Q496A3 300 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 CCSMST1Q4G0I0 132 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 TIGD2Q4W5G0 525 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 GALNT13Q8IUC8 556 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 DPP10Q8N608 796 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 FBXO15Q8NCQ5 510 aaPredicted RBP19.13■□□□□ 0.65
TREX1-205ENST00000625293 CXorf40AQ8TE69 158 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 FOXJ1Q92949 421 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 CCDC138Q96M89 665 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 ATG10Q9H0Y0 220 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 RSPH9Q9H1X1 276 aaPredicted RBP19.13■□□□□ 0.65
TREX1-205ENST00000625293 OR2AG1Q9H205 316 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 LRTM1Q9HBL6 345 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 C6orf203Q9P0P8 240 aaPredicted RBP19.13■□□□□ 0.65
TREX1-205ENST00000625293 GMPR2Q9P2T1 348 aaKnown RBP19.13■□□□□ 0.65
TREX1-205ENST00000625293 ATXN10Q9UBB4 475 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 ZNHIT2Q9UHR6 403 aa19.13■□□□□ 0.65
TREX1-205ENST00000625293 LIN7AO14910 233 aaPredicted RBP19.12■□□□□ 0.65
TREX1-205ENST00000625293 PDYNP01213 254 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 CATP04040 527 aaKnown RBP19.12■□□□□ 0.65
TREX1-205ENST00000625293 HSD17B1P14061 328 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 ITPKAP23677 461 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 PRPH2P23942 346 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 MAP4P27816 1152 aaKnown RBP19.12■□□□□ 0.65
TREX1-205ENST00000625293 PCDH1Q08174 1060 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 NFYCQ13952 458 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 CAPRIN1Q14444 709 aaKnown RBP19.12■□□□□ 0.65
TREX1-205ENST00000625293 SLC44A4Q53GD3 710 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 C2orf27AQ580R0 203 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 ZNF547Q8IVP9 402 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 TMEM125Q96AQ2 219 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 DUS3LQ96G46 650 aaKnown RBP19.12■□□□□ 0.65
TREX1-205ENST00000625293 COX14Q96I36 57 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 MAGEB10Q96LZ2 347 aaPredicted RBP19.12■□□□□ 0.65
TREX1-205ENST00000625293 NECTIN4Q96NY8 510 aa19.12■□□□□ 0.65
TREX1-205ENST00000625293 STOX2Q9P2F5 926 aaPredicted RBP19.12■□□□□ 0.65
TREX1-205ENST00000625293 EIF3LQ9Y262 564 aaKnown RBP19.12■□□□□ 0.65
TREX1-205ENST00000625293 IFRD1O00458 451 aaPredicted RBP19.11■□□□□ 0.65
TREX1-205ENST00000625293 BDKRB1P46663 353 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 ATXN3P54252 364 aaPredicted RBP19.11■□□□□ 0.65
TREX1-205ENST00000625293 TAS2R38P59533 333 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 CAMK2GQ13555 558 aaPredicted RBP19.11■□□□□ 0.65
TREX1-205ENST00000625293 SGO1Q5FBB7 561 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 AGBL4Q5VU57 503 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 ADAMTSL4Q6UY14 1074 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 AADATQ8N5Z0 425 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 ATL1Q8WXF7 558 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 TRMT61BQ9BVS5 477 aaKnown RBP19.11■□□□□ 0.65
TREX1-205ENST00000625293 C1orf109Q9NX04 203 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 RIMS3Q9UJD0 308 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 SNX6Q9UNH7 406 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 C17orf113A0A1B0GUU1 675 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 TCRBV3S1A0A5B6 114 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 AP1G1O43747 822 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 VEGFDO43915 354 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 UGDHO60701 494 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 NPPAP01160 153 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 JUPP14923 745 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 VARSP26640 1264 aaKnown RBP19.11■□□□□ 0.65
TREX1-205ENST00000625293 PBLDP30039 288 aaPredicted RBP19.11■□□□□ 0.65
TREX1-205ENST00000625293 RHDQ02161 417 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 IMPG1Q17R60 797 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 OGFRL1Q5TC84 451 aaPredicted RBP19.11■□□□□ 0.65
TREX1-205ENST00000625293 AGTRAPQ6RW13 159 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 IZUMO2Q6UXV1 221 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 THOC6Q86W42 341 aaKnown RBP19.11■□□□□ 0.65
TREX1-205ENST00000625293 SPATA24Q86W54 205 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 OR56A3Q8NH54 315 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 SELENOMQ8WWX9 145 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 ERLEC1Q96DZ1 483 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 ZNF514Q96K75 400 aaPredicted RBP19.11■□□□□ 0.65
TREX1-205ENST00000625293 PKP4Q99569 1192 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 ECSITQ9BQ95 431 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 INTS7Q9NVH2 962 aaKnown RBP19.11■□□□□ 0.65
TREX1-205ENST00000625293 EPS15L1Q9UBC2 864 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 LIMD1Q9UGP4 676 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 GPR34Q9UPC5 381 aa19.11■□□□□ 0.65
TREX1-205ENST00000625293 MYO10Q9HD67 2058 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 H3BM21 787 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 MID1O15344 667 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 PEX1O43933 1283 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 DNAJA2O60884 412 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 C1orf105O95561 183 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 ZNF8P17098 575 aaPredicted RBP19.1■□□□□ 0.65
TREX1-205ENST00000625293 PEX2P28328 305 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 IMPA1P29218 277 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 SOX9P48436 509 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 CST6Q15828 149 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 USP39Q53GS9 565 aaKnown RBP19.1■□□□□ 0.65
TREX1-205ENST00000625293 LIPJQ5W064 366 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 LPCAT4Q643R3 524 aa19.1■□□□□ 0.65
TREX1-205ENST00000625293 SUSD1Q6UWL2 747 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms