RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ABOP16442 354 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 MSH3P20585 1137 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 DNASE1P24855 282 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 AKT1P31749 480 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 HMGCLP35914 325 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 ALDH6A1Q02252 535 aaKnown RBP13.27□□□□□ -0.29
SNX1-214ENST00000625244 ZBTB17Q13105 803 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 IQCB1Q15051 598 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 PAFAH1B3Q15102 231 aaKnown RBP13.27□□□□□ -0.29
SNX1-214ENST00000625244 SARM1Q6SZW1 724 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 PRSS58Q8IYP2 241 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 MARVELD2Q8N4S9 558 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 TAB3Q8N5C8 712 aaPredicted RBP13.27□□□□□ -0.29
SNX1-214ENST00000625244 DTX3LQ8TDB6 740 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 TRIM51Q9BSJ1 452 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 CCM2Q9BSQ5 444 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 SPHK1Q9NYA1 384 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 ICKQ9UPZ9 632 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 KCNK1O00180 336 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 DSCR3O14972 297 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 SGTAO43765 313 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 TSPAN12O95859 305 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 TPM3P06753 285 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 MYBL2P10244 700 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 ITGAMP11215 1152 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 SPAM1P38567 509 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 CARSP49589 748 aaKnown RBP13.26□□□□□ -0.29
SNX1-214ENST00000625244 ARSFP54793 590 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 UBXN1Q04323 297 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 BCL7AQ4VC05 210 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 ATP13A4Q4VNC1 1196 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 UNC5AQ6ZN44 842 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 CEP128Q6ZU80 1094 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 FGD2Q7Z6J4 655 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 SIAH3Q8IW03 269 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 CPAMD8Q8IZJ3 1885 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 LILRB4Q8NHJ6 448 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 LINC00615Q96LM1 132 aaPredicted RBP13.26□□□□□ -0.29
SNX1-214ENST00000625244 HGH1Q9BTY7 390 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 POLDIP3Q9BY77 421 aaKnown RBP13.26□□□□□ -0.29
SNX1-214ENST00000625244 CEP41Q9BYV8 373 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 C3orf18Q9UK00 162 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 ASB1Q9Y576 335 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 MAU2Q9Y6X3 613 aa13.26□□□□□ -0.29
SNX1-214ENST00000625244 A0A0J9YY10 115 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 GLYATL1P3A0A0U1RQE8 302 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 KLHL33A6NCF5 533 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 LGALS16A8MUM7 142 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 ASNA1O43681 348 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 MCM3P25205 808 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 PCSK6P29122 969 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 RAB28P51157 221 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 DGKQP52824 942 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 GBE1Q04446 702 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 EEF1A2Q05639 463 aaKnown RBP13.25□□□□□ -0.29
SNX1-214ENST00000625244 SLC10A2Q12908 348 aaPredicted RBP13.25□□□□□ -0.29
SNX1-214ENST00000625244 KRT81Q14533 505 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 NOMO1Q15155 1222 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 CNSTQ6PJW8 725 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 NEK10Q6ZWH5 1172 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 NLRP9Q7RTR0 991 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 MCATQ8IVS2 390 aaKnown RBP13.25□□□□□ -0.29
SNX1-214ENST00000625244 STT3BQ8TCJ2 826 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 IMP4Q96G21 291 aaKnown RBP13.25□□□□□ -0.29
SNX1-214ENST00000625244 HES7Q9BYE0 225 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 OR52A5Q9H2C5 316 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 CUTCQ9NTM9 273 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 SMOXQ9NWM0 555 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 STMN3Q9NZ72 180 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 IL17CQ9P0M4 197 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 RNF6Q9Y252 685 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 KLHL20Q9Y2M5 609 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 CUBNO60494 3623 aa13.25□□□□□ -0.29
SNX1-214ENST00000625244 HIVEP2P31629 2446 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 IGHV1-45A0A0A0MS14 117 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 PRRG2O14669 202 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 BUD23O43709 281 aaKnown RBP13.24□□□□□ -0.29
SNX1-214ENST00000625244 NDST3O95803 873 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 MLYCDO95822 493 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 LY6G6DO95868 133 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 CHRM5P08912 532 aaPredicted RBP13.24□□□□□ -0.29
SNX1-214ENST00000625244 ZGLP1P0C6A0 271 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 PYGMP11217 842 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 PDHA2P29803 388 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 ZNF33BQ06732 778 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 BOP1Q14137 746 aaKnown RBP13.24□□□□□ -0.29
SNX1-214ENST00000625244 ABHD17BQ5VST6 288 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 ZDHHC20Q5W0Z9 365 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 ARHGEF18Q6ZSZ5 1173 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 LAPTM4BQ86VI4 370 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 CCNYQ8ND76 341 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 SPATA22Q8NHS9 363 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 HM13Q8TCT9 377 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 TADA1Q96BN2 335 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 MBD6Q96DN6 1003 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 RMND5BQ96G75 393 aaPredicted RBP13.24□□□□□ -0.29
SNX1-214ENST00000625244 MVB12BQ9H7P6 319 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 KCNJ16Q9NPI9 418 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 KLHL1Q9NR64 748 aa13.24□□□□□ -0.29
SNX1-214ENST00000625244 LRFN1Q9P244 771 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms