RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 RAD51AP1Q96B01 352 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 SPACA7Q96KW9 195 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 KCNA7Q96RP8 456 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 SLC29A3Q9BZD2 475 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 ATG10Q9H0Y0 220 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 TRIT1Q9H3H1 467 aaKnown RBP6.8□□□□□ -1.32
CBWD3-219ENST00000622817 ACTR8Q9H981 624 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 ACTR5Q9H9F9 607 aaPredicted RBP6.8□□□□□ -1.32
CBWD3-219ENST00000622817 MRPL40Q9NQ50 206 aaKnown RBP6.8□□□□□ -1.32
CBWD3-219ENST00000622817 KLQ9UEF7 1012 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 TRPS1Q9UHF7 1281 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 ZNF225Q9UK10 706 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 PSMD13Q9UNM6 376 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 SLC12A4Q9UP95 1085 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 KCNK6Q9Y257 313 aa6.8□□□□□ -1.32
CBWD3-219ENST00000622817 ZNF839A8K0R7 811 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 METTL12A8MUP2 240 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 CAPN14A8MX76 684 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 AXIN1O15169 862 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 SLC22A2O15244 555 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 HNRNPCL1O60812 293 aaKnown RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 CAPN1P07384 714 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 DCNP07585 359 aaKnown RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 LINC00032P0C843 101 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 ITPKAP23677 461 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 CD27P26842 260 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 RPL10P27635 214 aaKnown RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 HMOX2P30519 316 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 SCTRP47872 440 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 PXNP49023 591 aaPredicted RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 ARHGAP19Q14CB8 494 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 UAP1L1Q3KQV9 507 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 USP39Q53GS9 565 aaKnown RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 TPRG1LQ5T0D9 272 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 CAPN13Q6MZZ7 669 aaPredicted RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 SLC36A4Q6YBV0 504 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 RD3Q7Z3Z2 195 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 THOC6Q86W42 341 aaKnown RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 DCP2Q8IU60 420 aaKnown RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 SYTL1Q8IYJ3 562 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 TBC1D21Q8IYX1 336 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 FAM160A2Q8N612 972 aaPredicted RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 CPSF7Q8N684 471 aaKnown RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 FRMD1Q8N878 549 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 PHC3Q8NDX5 983 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 OR13H1Q8NG92 308 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 OR5AR1Q8NGP9 310 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 ZNF480Q8WV37 535 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 SNX19Q92543 992 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 PYCR2Q96C36 320 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 MED8Q96G25 268 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 PDXPQ96GD0 296 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 PRR11Q96HE9 360 aaPredicted RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 NSL1Q96IY1 281 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 CDK15Q96Q40 435 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 CCDC106Q9BWC9 280 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 MVB12BQ9H7P6 319 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 RIC8BQ9NVN3 520 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 TRNAU1APQ9NX07 287 aaKnown RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 ARMCX1Q9P291 453 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 LNPEPQ9UIQ6 1025 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 SLC22A14Q9Y267 594 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 PLEKHM1Q9Y4G2 1056 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 TIMM22Q9Y584 194 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 ST14Q9Y5Y6 855 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 HEBP2Q9Y5Z4 205 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 DGKBQ9Y6T7 804 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 CAPN7Q9Y6W3 813 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 ZFC3H1O60293 1989 aaKnown RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 EYSQ5T1H1 3165 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 KRT87PA6NCN2 255 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 PDZK1P1A8MUH7 402 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 CLGNO14967 610 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 UBDO15205 165 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 KDM1AO60341 852 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 UGDHO60701 494 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 UNC5CO95185 931 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 TNFP01375 233 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 KRT6AP02538 564 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 KRT6BP04259 564 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 THEGLP0DJG4 465 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 EPORP19235 508 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 AOC1P19801 751 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 CCND1P24385 295 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 ADSLP30566 484 aaPredicted RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 HOXA6P31267 233 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 HALP42357 657 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 KRT6CP48668 564 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 RASSF2P50749 326 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 PNLIPRP1P54315 467 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 CTBSQ01459 385 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 PCDH1Q08174 1060 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 SIGLEC14Q08ET2 396 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 UBAP2LQ14157 1087 aaKnown RBP6.79□□□□□ -1.32
CBWD3-219ENST00000622817 KRT33BQ14525 404 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 SPRED3Q2MJR0 410 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 ALG11Q2TAA5 492 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 GGTA1PQ4G0N0 100 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 XKR7Q5GH72 579 aa6.79□□□□□ -1.32
CBWD3-219ENST00000622817 WASH2PQ6VEQ5 465 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms