RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 NR1D2Q14995 579 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 ARHGAP19Q14CB8 494 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 GUSBP11Q6P575 273 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 PDPRQ8NCN5 879 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 RDH11Q8TC12 318 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 DENND1AQ8TEH3 1009 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 ADAMTS14Q8WXS8 1223 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 RAB11FIP5Q9BXF6 653 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 C12orf65Q9H3J6 166 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 KCNK9Q9NPC2 374 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 CPSF2Q9P2I0 782 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 RNF215Q9Y6U7 377 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 TMEM120BA0PK00 339 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 EME2A4GXA9 379 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 KRT87PA6NCN2 255 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 UBXN8O00124 270 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 KLK8O60259 260 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 SLC16A8O95907 504 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 ANXA5P08758 320 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 PNLIPP16233 465 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 HSD17B2P37059 387 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 HNMTP50135 292 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 RAB28P51157 221 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 ILKQ13418 452 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 MPP2Q14168 576 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 DHRS13Q6UX07 377 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 EFL1Q7Z2Z2 1120 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 CHCHD4Q8N4Q1 142 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 RAB42Q8N4Z0 105 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 IFI44Q8TCB0 444 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 ATL1Q8WXF7 558 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 NAT6Q93015 286 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 FBXL8Q96CD0 374 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 FAM111AQ96PZ2 611 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 CD274Q9NZQ7 290 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 SLC17A7Q9P2U7 560 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 LRIT1Q9P2V4 623 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 MID2Q9UJV3 735 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 TMCO1Q9UM00 188 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 PLAGL1Q9UM63 463 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 ICKQ9UPZ9 632 aa19.23■□□□□ 0.67
PDLIM2-221ENST00000622702 FAM221BA6H8Z2 402 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 RHPN2P1A8MT19 583 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 SUPT3HB4E1H0 165 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 SUPT3HO75486 399 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 ZWINTO95229 277 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 GUCA1CO95843 209 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 IMPA1P29218 277 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 PKLRP30613 574 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 SHMT2P34897 504 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 ETV4P43268 484 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 GPR3P46089 330 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 CYP2A13Q16696 494 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 SULT1C3Q6IMI6 304 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 MBOAT1Q6ZNC8 495 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 RAB44Q7Z6P3 723 aaPredicted RBP19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 TCAIMQ8N3R3 496 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 HMGCLL1Q8TB92 370 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 ZNF480Q8WV37 535 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 LCN9Q8WX39 176 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 EXT2Q93063 718 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 RHBDF1Q96CC6 855 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 SLC38A3Q99624 504 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 STOX2Q9P2F5 926 aaPredicted RBP19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 CIDEBQ9UHD4 219 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 LNPEPQ9UIQ6 1025 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 NCOR2Q9Y618 2525 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 ASXL3Q9C0F0 2248 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 SMIM24O75264 130 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 TAC1P20366 129 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 EPHA4P54764 986 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 NFKB2Q00653 900 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 PLCL1Q15111 1095 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 ANKS6Q68DC2 871 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 ZYG11AQ6WRX3 759 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 AMIGO1Q86WK6 493 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 ARMC2Q8NEN0 867 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 IL17FQ96PD4 163 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 EGFL8Q99944 293 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 TWSG1Q9GZX9 223 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 OR6C2Q9NZP2 312 aa19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 PTBP2Q9UKA9 531 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-221ENST00000622702 NCF1BA6NI72 391 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 ZNF839A8K0R7 811 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 NCF1CA8MVU1 366 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 G3V2L1 256 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 H3BQF6 201 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 HYAL3O43820 417 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 S100BP04271 92 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 GP1BAP07359 652 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 CDK4P11802 303 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 GFAPP14136 432 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 NCF1P14598 390 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 ATP5F1P24539 256 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 HPDP32754 393 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 GGT5P36269 586 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 PNLIPRP1P54315 467 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 ALDH18A1P54886 795 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 ZXDCQ2QGD7 858 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 PERM1Q5SV97 790 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms