RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 NME4O00746 187 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 PLD2O14939 933 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 CD3EAPO15446 510 aaKnown RBP12.19□□□□□ -0.46
LITAF-221ENST00000622633 XYLBO75191 536 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 HMBSP08397 361 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 PRSS56P0CW18 603 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 FDXRP22570 491 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 PTX3P26022 381 aaPredicted RBP12.19□□□□□ -0.46
LITAF-221ENST00000622633 ATP4BP51164 291 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 FBXO48Q5FWF7 155 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 TMEM236Q5W0B7 351 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 RAP1GAP2Q684P5 730 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 SERINC5Q86VE9 423 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 MON1AQ86VX9 555 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 HORMAD1Q86X24 394 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 SPPL2CQ8IUH8 684 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 MICU2Q8IYU8 434 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 FNDC5Q8NAU1 212 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 TRPV1Q8NER1 839 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 OR13C4Q8NGS5 318 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 TWIST2Q8WVJ9 160 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 SLC47A1Q96FL8 570 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 SEMA3CQ99985 751 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 YTHDF1Q9BYJ9 559 aaKnown RBP12.19□□□□□ -0.46
LITAF-221ENST00000622633 TRIM8Q9BZR9 551 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 UPF3AQ9H1J1 476 aaKnown RBP12.19□□□□□ -0.46
LITAF-221ENST00000622633 TMEM248Q9NWD8 314 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 TINAGQ9UJW2 476 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 MAPRE3Q9UPY8 281 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 BTRCQ9Y297 605 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 A0A0U1RQF3 1178 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 LOC285095A0A1B0GVY8 99 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 AZIN1O14977 448 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 SSX4O60224 188 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 B4GALT3O60512 393 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 GLP2RO95838 553 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 LINC00032P0C843 101 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 CHRM3P20309 590 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 CAPN3P20807 821 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 KELP23276 732 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 GRK4P32298 578 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 ACVRL1P37023 503 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 FPGSQ05932 587 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 PLEKHG6Q3KR16 790 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 C10orf62Q5T681 223 aaPredicted RBP12.18□□□□□ -0.46
LITAF-221ENST00000622633 FBXL22Q6P050 247 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 ZNF767PQ75MW2 155 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 MIB1Q86YT6 1006 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 NLGN4XQ8N0W4 816 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 CBR4Q8N4T8 237 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 TEX26Q8N6G2 289 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 C2orf69Q8N8R5 385 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 PHF10Q8WUB8 498 aaKnown RBP12.18□□□□□ -0.46
LITAF-221ENST00000622633 ROPN1LQ96C74 230 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 UCK2Q9BZX2 261 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 OR51B5Q9H339 312 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 DSN1Q9H410 356 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 TUBB1Q9H4B7 451 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 SDHAF3Q9NRP4 125 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 B3GNT2Q9NY97 397 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 WARS2Q9UGM6 360 aaKnown RBP12.18□□□□□ -0.46
LITAF-221ENST00000622633 TMPRSS11EQ9UL52 423 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 A0A1B0GTL3 188 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 FAM149AA5PLN7 773 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 ZBBXA8MT70 800 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 LINC00587B1AMM8 73 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 I3L521 148 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 CAPN5O15484 640 aaPredicted RBP12.18□□□□□ -0.46
LITAF-221ENST00000622633 TPST1O60507 370 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 IL7P13232 177 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 MTHFD2P13995 350 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 IL12AP29459 219 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 PRKAR1BP31321 381 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 NFKB2Q00653 900 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 POLD3Q15054 466 aaPredicted RBP12.18□□□□□ -0.46
LITAF-221ENST00000622633 ZNF124Q15973 351 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 DGUOKQ16854 277 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 WDR48Q8TAF3 677 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 TUBGCP3Q96CW5 907 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 MSANTD3Q96H12 275 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 SPC25Q9HBM1 224 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 RPH3AQ9Y2J0 694 aaPredicted RBP12.18□□□□□ -0.46
LITAF-221ENST00000622633 GMPPBQ9Y5P6 360 aa12.18□□□□□ -0.46
LITAF-221ENST00000622633 TRAV20A0A0B4J274 112 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 KRT87PA6NCN2 255 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 GLTPD2A6NH11 291 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 ANGPT2O15123 496 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 SEC24AO95486 1093 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 FGF4P08620 206 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 BMP2P12643 396 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 AKR1A1P14550 325 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 TEKQ02763 1124 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 RPS6KA2Q15349 733 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 PARP15Q460N3 678 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 TBCELQ5QJ74 424 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 MSANTD2Q6P1R3 559 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 TMEM81Q6P7N7 255 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 BRAT1Q6PJG6 821 aa12.17□□□□□ -0.46
LITAF-221ENST00000622633 RAB44Q7Z6P3 723 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms