RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TMEM164Q5U3C3 297 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 HEATR6Q6AI08 1181 aaKnown RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 CNSTQ6PJW8 725 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 SCARA5Q6ZMJ2 495 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 TMPRSS11AQ6ZMR5 421 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 OTOP1Q7RTM1 612 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 PIWIL4Q7Z3Z4 852 aaKnown RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 B3GNT8Q7Z7M8 397 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 RDH10Q8IZV5 341 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 FAM26EQ8N5C1 309 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 CAMKK1Q8N5S9 505 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 ARFGAP1Q8N6T3 406 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 OR6M1Q8NGM8 313 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 TMEM174Q8WUU8 243 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 FCGR1BQ92637 280 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 PYCR2Q96C36 320 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 TRMT61AQ96FX7 289 aaKnown RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 ACOX2Q99424 681 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 VAT1Q99536 393 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 OMDQ99983 421 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 CHCHD6Q9BRQ6 235 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 LRRC4Q9HBW1 653 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 CPA4Q9UI42 421 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 EFCAB10A6NFE3 127 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 NT5C1B-RDH14C9J2C7 533 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 UPK1AO00322 258 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 BRINP1O60477 761 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 USP2O75604 605 aaPredicted RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 DDNO94850 711 aaPredicted RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 LDOC1O95751 146 aaPredicted RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 LSM8O95777 96 aaKnown RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 RRASP10301 218 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 CHRM3P20309 590 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 VAMP1P23763 118 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 YWHAQP27348 245 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 GRM3Q14832 879 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 LTB4RQ15722 352 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 BAK1Q16611 211 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 DUSP6Q16828 381 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 TIGD6Q17RP2 521 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 RUNDC3AQ59EK9 446 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 CLLU1Q5K131 121 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 PDE12Q6L8Q7 609 aaKnown RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 ANKRD54Q6NXT1 300 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 LRFN4Q6PJG9 635 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 AHSA2Q719I0 299 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 NLRP8Q86W28 1048 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 METTL23Q86XA0 190 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 FUNDC1Q8IVP5 155 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 HS3ST5Q8IZT8 346 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 ZSCAN1Q8NBB4 408 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 ATAD1Q8NBU5 361 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 DNERQ8NFT8 737 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 YIPF5Q969M3 257 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 CCDC17Q96LX7 622 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 MFSD14AQ96MC6 490 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 RNF157Q96PX1 679 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 SLC9A7Q96T83 725 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 PELOQ9BRX2 385 aaKnown RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 ZPBPQ9BS86 351 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 TBCDQ9BTW9 1192 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 TRIM54Q9BYV2 358 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 TMEM39BQ9GZU3 492 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 MEAF6Q9HAF1 191 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 FBRSL1Q9HCM7 1045 aaKnown RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 CYP4F12Q9HCS2 524 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 CD93Q9NPY3 652 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 NRBP2Q9NSY0 501 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 AASSQ9UDR5 926 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 UBQLN2Q9UHD9 624 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 MUTYHQ9UIF7 546 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 GINS2Q9Y248 185 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 COL11A2P13942 1736 aaPredicted RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 A0A0U1RQS6 177 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 A0A1B0GVM2 712 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 TCRBV5S1A1TA0A578 114 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 WWP2O00308 870 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 MYL12BO14950 172 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 TRUB2O95900 331 aaKnown RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 ITGBL1O95965 494 aaPredicted RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 MLNP12872 115 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 MYL12AP19105 171 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 CAPN3P20807 821 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ZP3P21754 424 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 NOS2P35228 1153 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 KCNC1P48547 511 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 CASP9P55211 416 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ABATP80404 500 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 GTF2BQ00403 316 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 DGKZQ13574 1117 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 FGFBP1Q14512 234 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 USP10Q14694 798 aaKnown RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 SGO1Q5FBB7 561 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 GPAT2Q6NUI2 795 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ERICH5Q6P6B1 374 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 MIER2Q8N344 545 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SVOPLQ8N434 492 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 FSTL5Q8N475 847 aaPredicted RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 C9orf62Q8N4C0 152 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ZNF248Q8NDW4 579 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms