RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 NEIL2Q969S2 332 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 APIPQ96GX9 242 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 MRGPRX1Q96LB2 322 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 MCCC1Q96RQ3 725 aaPredicted RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 SLC17A9Q9BYT1 436 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 SYNDIG1Q9H7V2 258 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 FGF22Q9HCT0 170 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 THAP10Q9P2Z0 257 aaPredicted RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 STK39Q9UEW8 545 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 DLGAP4Q9Y2H0 992 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 PCDHB1Q9Y5F3 818 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 SGTAO43765 313 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 RASSF9O75901 435 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 MC1RQ01726 317 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 FCHO2Q0JRZ9 810 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 GPR33Q49SQ1 333 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 AGBL4Q5VU57 503 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 KLHDC8BQ8IXV7 354 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 LIX1Q8N485 282 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 DTWD1Q8N5C7 304 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 KYQ8NBH2 561 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 SMRP1Q8NCR6 262 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 ISL2Q96A47 359 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 RHBGQ9H310 441 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 STN1Q9H668 368 aaKnown RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 COPS7BQ9H9Q2 264 aaPredicted RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 LMAN1LQ9HAT1 526 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 CUEDC1Q9NWM3 386 aaPredicted RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 MKS1Q9NXB0 559 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 SPASTQ9UBP0 616 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 CNOT6Q9ULM6 557 aaKnown RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 ST14Q9Y5Y6 855 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 TRPC5OSA6NMA1 111 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 TMEM114B3SHH9 223 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 PRKRAO75569 313 aaKnown RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 ESRRBO95718 433 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 SOD1P00441 154 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 PDGFBP01127 241 aaPredicted RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 IL1RL1Q01638 556 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 C6orf136Q5SQH8 315 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 PTCRAQ6ISU1 281 aaPredicted RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 ASRGL1Q7L266 308 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 TECPR1Q7Z6L1 1165 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 YTHDF3Q7Z739 585 aaKnown RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 BHLHE22Q8NFJ8 381 aaPredicted RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 OR4K1Q8NGD4 311 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 ISG20Q96AZ6 181 aaKnown RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 RAB3IPQ96QF0 476 aaPredicted RBP10.25□□□□□ -0.77
VPS11-208ENST00000621676 TUBGCP5Q96RT8 1024 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 PHOX2BQ99453 314 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 ZSCAN5AQ9BUG6 496 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 PARVBQ9HBI1 364 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 SGK2Q9HBY8 427 aa10.25□□□□□ -0.77
VPS11-208ENST00000621676 C2orf16Q68DN1 1984 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 MAGEB17A8MXT2 336 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 IFRD1O00458 451 aaPredicted RBP10.24□□□□□ -0.77
VPS11-208ENST00000621676 LBPP18428 481 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 CDK3Q00526 305 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 NRF1Q16656 503 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 SPANXN4Q5MJ08 99 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 FUNDC1Q8IVP5 155 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 SUGP1Q8IWZ8 645 aaKnown RBP10.24□□□□□ -0.77
VPS11-208ENST00000621676 OR5AK3PQ8NH89 298 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 FBXO30Q8TB52 745 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 CCDC126Q96EE4 140 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 HIC2Q96JB3 615 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 CDX2Q99626 313 aaPredicted RBP10.24□□□□□ -0.77
VPS11-208ENST00000621676 CD244Q9BZW8 370 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 CEP44Q9C0F1 390 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 UBE2ZQ9H832 354 aaPredicted RBP10.24□□□□□ -0.77
VPS11-208ENST00000621676 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.24□□□□□ -0.77
VPS11-208ENST00000621676 SUFUQ9UMX1 484 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 A0A1W2PQF6 199 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 SYNDIG1LA6NDD5 238 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 ISM1B1AKI9 464 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 K7EPI3 171 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 SH3BP5O60239 455 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 CYP2A7P20853 494 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 ITGB7P26010 798 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 KIR2DL1P43626 348 aaPredicted RBP10.24□□□□□ -0.77
VPS11-208ENST00000621676 ST13P50502 369 aaKnown RBP10.24□□□□□ -0.77
VPS11-208ENST00000621676 CEACAM7Q14002 265 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 FLOT2Q14254 428 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 HKDC1Q2TB90 917 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 TMTC4Q5T4D3 741 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 CYP2U1Q7Z449 544 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 THOC6Q86W42 341 aaKnown RBP10.24□□□□□ -0.77
VPS11-208ENST00000621676 SPPL2CQ8IUH8 684 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 ZNF480Q8WV37 535 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 ARSGQ96EG1 525 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 CCM2Q9BSQ5 444 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 LRMDAQ9H2I8 198 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 STARD5Q9NSY2 213 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 RP1P56715 2156 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 KIAA1671Q9BY89 1806 aa10.24□□□□□ -0.77
VPS11-208ENST00000621676 A0A088AWK7 358 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 FAM170BA6NMN3 283 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 ZNF839A8K0R7 811 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 FBP2O00757 339 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms