RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 KLHL42Q9P2K6 505 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 BCAP29Q9UHQ4 241 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 PAIP2BQ9ULR5 123 aaKnown RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 OR1A2Q9Y585 309 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 FADS3Q9Y5Q0 445 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 CFAP20Q9Y6A4 193 aaKnown RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 PAK4O96013 591 aaPredicted RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 PDYNP01213 254 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 GSTM1P09488 218 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 PCNAP12004 261 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 HNMTP50135 292 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 GSTM4Q03013 218 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 CDC16Q13042 620 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 SP140Q13342 867 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 CACHD1Q5VU97 1274 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 LPCAT4Q643R3 524 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 SLC2A7Q6PXP3 512 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 AGTRAPQ6RW13 159 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 LIX1Q8N485 282 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 AADATQ8N5Z0 425 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 TMCO5AQ8N6Q1 288 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 GFM2Q969S9 779 aaKnown RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 ABHD8Q96I13 439 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 GBP5Q96PP8 586 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 OSGEPL1Q9H4B0 414 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 EGFL7Q9UHF1 273 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 CNOT6Q9ULM6 557 aaKnown RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 BBIP1A8MTZ0 92 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 EIF3FO00303 357 aaPredicted RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 SLC28A1O00337 649 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 LRATO95237 230 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 SOD1P00441 154 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 GNPDA1P46926 289 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 VASPP50552 380 aaPredicted RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 AP1S2P56377 157 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 KLC1Q07866 573 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 ADAM15Q13444 863 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 CCDC92Q53HC0 331 aaPredicted RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 OGFOD2Q6N063 350 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 THOC6Q86W42 341 aaKnown RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 UBTD2Q8WUN7 234 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 CLIP3Q96DZ5 547 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 DHRS1Q96LJ7 313 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 CCT7Q99832 543 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 GDF15Q99988 308 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 ZNF576Q9H609 170 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 FBXL12Q9NXK8 326 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 TRPS1Q9UHF7 1281 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 PLAGL1Q9UM63 463 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 SNX6Q9UNH7 406 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 PRORSD1PA6NEY8 169 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 SLCO2B1O94956 709 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 SLC16A8O95907 504 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 PRKG2Q13237 762 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 PON2Q15165 354 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 ZXDCQ2QGD7 858 aaPredicted RBP9.66□□□□□ -0.86
VTA1-205ENST00000620996 SAMD4BQ5PRF9 694 aaKnown RBP9.66□□□□□ -0.86
VTA1-205ENST00000620996 PIP5KL1Q5T9C9 394 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 KIAA1211LQ6NV74 962 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 BLOC1S3Q6QNY0 202 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 KIAA1958Q8N8K9 716 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 ZFAND2BQ8WV99 257 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 GLMNQ92990 594 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 HIC2Q96JB3 615 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 MTERF1Q99551 399 aaKnown RBP9.66□□□□□ -0.86
VTA1-205ENST00000620996 PKP4Q99569 1192 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 DPY30Q9C005 99 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 COPS7BQ9H9Q2 264 aaPredicted RBP9.66□□□□□ -0.86
VTA1-205ENST00000620996 TRIM39Q9HCM9 518 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 PLXNB3Q9ULL4 1909 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 E7EQ34 232 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 GFYI3L273 518 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 SLC16A5O15375 505 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 ZCCHC18P0CG32 403 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 RPL10P27635 214 aaKnown RBP9.66□□□□□ -0.86
VTA1-205ENST00000620996 IL12AP29459 219 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 SGCGQ13326 291 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 PAGE3Q5JUK9 113 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 FOXB2Q5VYV0 432 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 IZUMO2Q6UXV1 221 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 CYP2U1Q7Z449 544 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 DHDDSQ86SQ9 333 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 PPM1MQ96MI6 270 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 TSSK3Q96PN8 268 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 EBPLQ9BY08 206 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 FZD3Q9NPG1 666 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 TM7SF3Q9NS93 570 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 STOX2Q9P2F5 926 aaPredicted RBP9.66□□□□□ -0.86
VTA1-205ENST00000620996 MAP10Q9P2G4 905 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 NFKBIL1Q9UBC1 381 aaPredicted RBP9.66□□□□□ -0.86
VTA1-205ENST00000620996 LEF1Q9UJU2 399 aaPredicted RBP9.66□□□□□ -0.86
VTA1-205ENST00000620996 ASF1AQ9Y294 204 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 F5P12259 2224 aa9.66□□□□□ -0.86
VTA1-205ENST00000620996 ZNF106Q9H2Y7 1883 aaKnown RBP9.66□□□□□ -0.86
VTA1-205ENST00000620996 TBC1D3DA0A087WVF3 549 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TBC1D3IA0A087WXS9 549 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TBC1D3EA0A087X179 549 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TBC1D3KA0A087X1G2 549 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TBC1D3FA6NER0 549 aaPredicted RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 TBC1D3LB9A6J9 549 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms