RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 NCF4Q15080 339 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 BHLHA9Q7RTU4 235 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 FAM81AQ8TBF8 368 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 PPCDCQ96CD2 204 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 RBM18Q96H35 190 aaKnown RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 LRCH3Q96II8 777 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 C3orf30Q96M34 536 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 C5orf34Q96MH7 638 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 KCNA7Q96RP8 456 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 FAIM2Q9BWQ8 316 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 SLC25A51Q9H1U9 297 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 MAGEH1Q9H213 219 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 AKTIPQ9H8T0 292 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 REEP1Q9H902 201 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 TREX1Q9NSU2 369 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 MARCH4Q9P2E8 410 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 ERVW-1Q9UQF0 538 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 INSL5Q9Y5Q6 135 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 HS3ST4Q9Y661 456 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 DGKBQ9Y6T7 804 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 TRIM43BA6NCK2 446 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 PLK4O00444 970 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 TEX28O15482 410 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 FAM20BO75063 409 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 TRMUO75648 421 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 HIST1H2ABP04908 130 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 HOXD8P13378 290 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 KCNC1P48547 511 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 DNAJB13P59910 316 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 RTP2Q5QGT7 225 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 MSANTD2Q6P1R3 559 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 HIST3H2AQ7L7L0 130 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 GALNT10Q86SR1 603 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 TMEM126BQ8IUX1 230 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 OFCC1Q8IZS5 231 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 CBR4Q8N4T8 237 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 OR10T2Q8NGX3 314 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF563Q8TA94 476 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 PTCD2Q8WV60 388 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 PIGKQ92643 395 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 HIST1H2ACQ93077 130 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 MAELQ96JY0 434 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 SUSD3Q96L08 255 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 SRMSQ9H3Y6 488 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 MEAF6Q9HAF1 191 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 PREBQ9HCU5 417 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 TBC1D30Q9Y2I9 924 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 HEMK1Q9Y5R4 338 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF780BQ9Y6R6 833 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 C2orf78A6NCI8 922 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 UBFD1O14562 309 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 H6PDO95479 791 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 RHOP08100 348 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 ADH5P11766 374 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 SLC7A1P30825 629 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 NEK2P51955 445 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 RAB8AP61006 207 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 ELP6Q0PNE2 266 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 SLC13A2Q13183 592 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 MAD2L1Q13257 205 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 ZDHHC20Q5W0Z9 365 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 PAQR3Q6TCH7 311 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 SUSD1Q6UWL2 747 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 KIAA0408Q6ZU52 694 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 CHSY3Q70JA7 882 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 CILP2Q8IUL8 1156 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 OR8H2Q8N162 312 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 PELI3Q8N2H9 469 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 SFRP1Q8N474 314 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 BEND7Q8N7W2 519 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 HMGCLL1Q8TB92 370 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 PHF10Q8WUB8 498 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 IRGQQ8WZA9 623 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 VPS35Q96QK1 796 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 TTLL2Q9BWV7 592 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 TPK1Q9H3S4 243 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 SUV39H2Q9H5I1 410 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 GALNT8Q9NY28 637 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 RSL24D1Q9UHA3 163 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 PLAGL1Q9UM63 463 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 RNF11Q9Y3C5 154 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 OTOFQ9HC10 1997 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 DOCK3Q8IZD9 2030 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 K7ERQ8 282 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 PIP5K1BO14986 540 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 GUCY1B2O75343 617 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 CLIC3O95833 236 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 ANXA4P09525 319 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 HAPLN1P10915 354 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 EN2P19622 333 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 CES1P23141 567 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 SMARCB1Q12824 385 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 RAPSNQ13702 412 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF648Q5T619 568 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 BTN2A1Q7KYR7 527 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 TICAM1Q8IUC6 712 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 KIAA2013Q8IYS2 634 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 EID3Q8N140 333 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 OR4E2Q8NGC2 313 aa8.1□□□□□ -1.11
PTPDC1-204ENST00000620992 OR2T34Q8NGX1 318 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms