RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CACUL1Q86Y37 369 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 PTRH1Q86Y79 214 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 RIMKLAQ8IXN7 391 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF614Q8N883 585 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 PXYLP1Q8TE99 480 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ATL1Q8WXF7 558 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 MUL1Q969V5 352 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF599Q96NL3 588 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 OSBPL10Q9BXB5 764 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 SLC25A51Q9H1U9 297 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 TRIT1Q9H3H1 467 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 DSN1Q9H410 356 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ABCC13Q9NSE7 274 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ANKMY1Q9P2S6 941 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF451Q9Y4E5 1061 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 GMPPBQ9Y5P6 360 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 MKI67P46013 3256 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 A0A1W2PQ45 241 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 A0A1W2PQY0 241 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 H3BN98 237 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 SLC7A4O43246 635 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 SSX4O60224 188 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 PAPSS2O95340 614 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 C1QCP02747 245 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 JUNBP17275 347 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 S100A1P23297 94 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 IGFBP5P24593 272 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 AQP1P29972 269 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CYP2C18P33260 490 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 S100A3P33764 101 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CHI3L1P36222 383 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ACVRL1P37023 503 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CASP9P55211 416 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 RACK1P63244 317 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ABRAXAS2Q15018 415 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 HIST2H2ACQ16777 129 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 TIGD5Q53EQ6 642 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 KDELC1Q6UW63 502 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 LRRTM3Q86VH5 581 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CYP4Z1Q86W10 505 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 DCP2Q8IU60 420 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 C10orf111Q8N326 155 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CELF2-AS1Q8N7Q2 184 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 NETO1Q8TDF5 533 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 S100ZQ8WXG8 99 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 FUBP1Q96AE4 644 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 RBM4BQ9BQ04 359 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 SLX1AQ9BQ83 275 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 TTPALQ9BTX7 342 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 RBM4Q9BWF3 364 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 DCSTAMPQ9H295 470 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 TRIM39Q9HCM9 518 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 SLC6A13Q9NSD5 602 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 TRPC4Q9UBN4 977 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 DNAJB9Q9UBS3 223 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 INTS6Q9UL03 887 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 TMCC3Q9ULS5 477 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 B3GNT3Q9Y2A9 372 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ELOVL7A1L3X0 281 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 FAM92AA1XBS5 289 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 PRR23D1E9PI22 279 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CXCR6O00574 342 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 TLL1O43897 1013 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 GUCY1B2O75343 617 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 GPR32O75388 356 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 MLYCDO95822 493 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 PRR23D2P0DMB1 279 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 C7P10643 843 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 WARSP23381 471 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CD40LGP29965 261 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 OR1D2P34982 312 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ZFP36L2P47974 494 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 IL2P60568 153 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CPSF6Q16630 551 aaKnown RBP eCLIP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 DDR2Q16832 855 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 AGAP7PQ5VUJ5 663 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 LAIR1Q6GTX8 287 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 NPAS4Q8IUM7 802 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 OR6Q1Q8NGQ2 317 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 C17orf50Q8WW18 174 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 NACC2Q96BF6 587 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 LINGO1Q96FE5 620 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 BEX2Q9BXY8 128 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ADGRE3Q9BY15 652 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CIPCQ9C0C6 399 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 MFSD1Q9H3U5 465 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 FAM124BQ9H5Z6 455 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 NMUR1Q9HB89 426 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 KRT84Q9NSB2 600 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 MARCH2Q9P0N8 246 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 DUSP12Q9UNI6 340 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 A0A0U1RQF3 1178 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 FAM234BA2RU67 622 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 FAM47E-STBD1D6RA91 191 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 RFPL2O75678 378 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 UROSP10746 265 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 CYBAP13498 195 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 FDXRP22570 491 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 HSPA7P48741 367 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 KCNC4Q03721 635 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms