RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 H7C0S8 307 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 PER2O15055 1255 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 GDF5P43026 501 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 GSSP48637 474 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 RING1Q06587 406 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 MTA1Q13330 715 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 SGO1Q5FBB7 561 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 POP5Q969H6 163 aaKnown RBP19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 SPON2Q9BUD6 331 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 SP140LQ9H930 580 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 POU2F3Q9UKI9 436 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 ZNF490Q9ULM2 529 aaPredicted RBP19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 PNMA8BQ9ULN7 279 aaPredicted RBP19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 NDRG4Q9ULP0 352 aaKnown RBP19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 ERVK-11Q9UQG0 969 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 MAN2B2Q9Y2E5 1009 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 RBMX2Q9Y388 322 aaKnown RBP19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 MICAL3Q7RTP6 2002 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 OR2A25A4D2G3 310 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 ANKRD66B4E2M5 251 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 F5H5T6 163 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 FAM20BO75063 409 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 UPK1BO75841 260 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 OAZ2O95190 189 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 F11P03951 625 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 GSNP06396 782 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 BCKDHAP12694 445 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 PTPN6P29350 595 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 HOXA9P31269 272 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 SLC6A4P31645 630 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 KRT20P35900 424 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 HNRNPFP52597 415 aaKnown RBP19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 SLC13A2Q13183 592 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 GTF2H3Q13889 308 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 OR2T5Q6IEZ7 315 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 ZNF551Q7Z340 670 aaPredicted RBP19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 PLD3Q8IV08 490 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 LYSMD2Q8IV50 215 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 KIAA1958Q8N8K9 716 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 OR2T29Q8NH02 315 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 SIGLEC11Q96RL6 698 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 INPP5KQ9BT40 448 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 KCNH6Q9H252 994 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 CPNE5Q9HCH3 593 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 ANKHQ9HCJ1 492 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 CCNB1IP1Q9NPC3 277 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 VPS51Q9UID3 782 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 Q9Y3F1 56 aa19.12■□□□□ 0.65
PDLIM3-212ENST00000620787 CLDN24A6NM45 220 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 WNT9AO14904 365 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 ULK1O75385 1050 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 LCKP06239 509 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 CD36P16671 472 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 EPHA2P29317 976 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 SERPINB1P30740 379 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 KCNQ1P51787 676 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 TAF10Q12962 218 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 NFE2Q16621 373 aaPredicted RBP19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 C5orf22Q49AR2 442 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 CYP2U1Q7Z449 544 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 TTC29Q8NA56 475 aaPredicted RBP19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 DNAJB8Q8NHS0 232 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 MCFD2Q8NI22 146 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 ZHX1-C8orf76Q96EF9 292 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 CEP295NLQ96MC4 621 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 CTRCQ99895 268 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 APOL4Q9BPW4 351 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 TM9SF3Q9HD45 589 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 AGO1Q9UL18 857 aaKnown RBP19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 VWA8A3KMH1 1905 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 MANBAO00462 879 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 TSPAN3O60637 253 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 MRPS14O60783 128 aaKnown RBP19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 WDR47O94967 919 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 B3GALT4O96024 378 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 STK40Q8N2I9 435 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 ATAD1Q8NBU5 361 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 ADAM2Q99965 735 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 MYOCQ99972 504 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 TLR8Q9NR97 1041 aaKnown RBP19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 OARD1Q9Y530 152 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 ANGPTL3Q9Y5C1 460 aa19.11■□□□□ 0.65
PDLIM3-212ENST00000620787 EFCAB9A8MZ26 197 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 KDELR3O43731 214 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 ZNF682O95780 498 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 CDKN2CP42773 168 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 ABHD18Q0P651 414 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 SERINC5Q86VE9 423 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 CCDC71Q8IV32 467 aaPredicted RBP19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 SLC7A5P1Q8MH63 180 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 TMEM132CQ8N3T6 1108 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 PARK7Q99497 189 aaKnown RBP19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 CD244Q9BZW8 370 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 CCSER2Q9H7U1 834 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 IL1RAPQ9NPH3 570 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 ABCB10Q9NRK6 738 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 OPTCQ9UBM4 332 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 PCDHB5Q9Y5E4 795 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 ISPDA4D126 451 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 MYO1GB0I1T2 1018 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms