RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 RANGRFQ9HD47 186 aaPredicted RBP12.87□□□□□ -0.35
COL1A2-213ENST00000620463 NANSQ9NR45 359 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 CPOXP36551 454 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 HSPA7P48741 367 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 DIO3P55073 304 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 GPAT3Q53EU6 434 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 KLHL22Q53GT1 634 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 METTL4Q8N3J2 472 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 MFSD2AQ8NA29 543 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 PYURFQ96I23 114 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 ZNF607Q96SK3 696 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 ELOVL4Q9GZR5 314 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 ARL6Q9H0F7 186 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 ATP13A1Q9HD20 1204 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 ZIM2Q9NZV7 527 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 MYH7P12883 1935 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 MAGEB17A8MXT2 336 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 PER2O15055 1255 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 DCLK1O15075 740 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 SGCEO43556 437 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 AHSGP02765 367 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 PRKAR2AP13861 404 aaKnown RBP12.87□□□□□ -0.35
COL1A2-213ENST00000620463 PKMP14618 531 aaKnown RBP12.87□□□□□ -0.35
COL1A2-213ENST00000620463 PSMA6P60900 246 aaKnown RBP12.87□□□□□ -0.35
COL1A2-213ENST00000620463 HECTD3Q5T447 861 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 C10orf62Q5T681 223 aaPredicted RBP12.87□□□□□ -0.35
COL1A2-213ENST00000620463 MFSD14CQ5VZR4 134 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 GRAMD2AQ8IUY3 354 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 CRYBG2Q8N1P7 616 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 FTMTQ8N4E7 242 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 IL31RAQ8NI17 732 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 BSNDQ8WZ55 320 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 TMEM159Q96B96 161 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 KLHL5Q96PQ7 755 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 POLR2J3Q9H1A7 115 aaKnown RBP12.87□□□□□ -0.35
COL1A2-213ENST00000620463 ST6GALNAC4Q9H4F1 302 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 ASB8Q9H765 288 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 CNTN3Q9P232 1028 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 HACL1Q9UJ83 578 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 POFUT2Q9Y2G5 429 aa12.87□□□□□ -0.35
COL1A2-213ENST00000620463 CTSHP09668 335 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 AGXTP21549 392 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 AFF1P51825 1210 aaKnown RBP12.86□□□□□ -0.35
COL1A2-213ENST00000620463 CAPSQ13938 189 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 SPATS1Q496A3 300 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 ZNF484Q5JVG2 852 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 GNASQ5JWF2 1037 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 PYHIN1Q6K0P9 492 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 TAPT1Q6NXT6 567 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 TXNDC5Q8NBS9 432 aaKnown RBP12.86□□□□□ -0.35
COL1A2-213ENST00000620463 HAVCR1Q96D42 359 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 COQ10AQ96MF6 247 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 FTHL17Q9BXU8 183 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 CDT1Q9H211 546 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 VRTNQ9H8Y1 702 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 VPS28Q9UK41 221 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 M0R036 132 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 PMM2O15305 246 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
COL1A2-213ENST00000620463 PDGFAP04085 211 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 IL4RP24394 825 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 HOXA10P31260 410 aaPredicted RBP12.86□□□□□ -0.35
COL1A2-213ENST00000620463 RPS14P62263 151 aaKnown RBP12.86□□□□□ -0.35
COL1A2-213ENST00000620463 C4orf46Q504U0 113 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 NOL9Q5SY16 702 aaKnown RBP12.86□□□□□ -0.35
COL1A2-213ENST00000620463 LCN8Q6JVE9 175 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 TMEM151AQ8N4L1 468 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 GAL3ST3Q96A11 431 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 SGTBQ96EQ0 304 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 PFDN5Q99471 154 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 SPATA5L1Q9BVQ7 753 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 SEC14L3Q9UDX4 400 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 RNF11Q9Y3C5 154 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 DNMT3AQ9Y6K1 912 aaPredicted RBP12.86□□□□□ -0.35
COL1A2-213ENST00000620463 DFNA5O60443 496 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 NME6O75414 186 aaPredicted RBP12.86□□□□□ -0.35
COL1A2-213ENST00000620463 RFPL3O75679 317 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 NDST3O95803 873 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 STSP08842 583 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 OR56A5P0C7T3 313 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 ATXN1P54253 815 aaKnown RBP12.86□□□□□ -0.35
COL1A2-213ENST00000620463 CDK10Q15131 360 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 GRIK5Q16478 980 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 CES5AQ6NT32 575 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 ASB15Q8WXK1 588 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 KAT2AQ92830 837 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 MAGEB10Q96LZ2 347 aaPredicted RBP12.86□□□□□ -0.35
COL1A2-213ENST00000620463 FAM129BQ96TA1 746 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 NFKBIZQ9BYH8 718 aa12.86□□□□□ -0.35
COL1A2-213ENST00000620463 ZBTB20Q9HC78 741 aaPredicted RBP12.86□□□□□ -0.35
COL1A2-213ENST00000620463 NME4O00746 187 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 KELP23276 732 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 SLC25A11Q02978 314 aaKnown RBP12.85□□□□□ -0.35
COL1A2-213ENST00000620463 PCDH1Q08174 1060 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 GANABQ14697 944 aaKnown RBP12.85□□□□□ -0.35
COL1A2-213ENST00000620463 OXA1LQ15070 435 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 SLC36A3Q495N2 470 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 ESCO2Q56NI9 601 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 XKR6Q5GH73 641 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 GCNT6Q5T4J0 391 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms