RNA–Protein interactions for RNA: ENST00000619810.4

SHISA5-220, Transcript of shisa family member 5, humanhuman

TSL 2 BASIC

Gene SHISA5, Length 2,385 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-220ENST00000619810 C6orf141Q5SZD1 244 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 SPESP1Q6UW49 350 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.2■□□□□ 0.59e-8■□□□□ 9
SHISA5-220ENST00000619810 HTR3DQ70Z44 454 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 ECHDC3Q96DC8 303 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 ASIC4Q96FT7 647 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 MAGED4Q96JG8 741 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 CLEC4EQ9ULY5 219 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 ZNF510Q9Y2H8 683 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 PIKFYVEQ9Y2I7 2098 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 TMX2-CTNND1H3BSU7 103 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 WNT9AO14904 365 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 C8GP07360 202 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 PTPN6P29350 595 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 DCTP40126 519 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 RANBP1P43487 201 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 SNRPD1P62314 119 aaKnown RBP18.2■□□□□ 0.5
SHISA5-220ENST00000619810 B4GALNT1Q00973 533 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 ABHD18Q0P651 414 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 KCNAB2Q13303 367 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 LAPTM5Q13571 262 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 BOP1Q14137 746 aaKnown RBP18.2■□□□□ 0.5
SHISA5-220ENST00000619810 GBX1Q14549 363 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 LRRC66Q68CR7 880 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 UBE2R2Q712K3 238 aaPredicted RBP18.2■□□□□ 0.5
SHISA5-220ENST00000619810 HS3ST5Q8IZT8 346 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 BEND7Q8N7W2 519 aaPredicted RBP18.2■□□□□ 0.5
SHISA5-220ENST00000619810 CHDHQ8NE62 594 aaPredicted RBP18.2■□□□□ 0.5
SHISA5-220ENST00000619810 NETO1Q8TDF5 533 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 NCLNQ969V3 563 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 INTS6Q9UL03 887 aaKnown RBP18.2■□□□□ 0.5
SHISA5-220ENST00000619810 BLOC1S6Q9UL45 172 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 TMED5Q9Y3A6 229 aa18.2■□□□□ 0.5
SHISA5-220ENST00000619810 PER2O15055 1255 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 NOBOXO60393 691 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 OR56A5P0C7T3 313 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 CCNA2P20248 432 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 AOAHP28039 575 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 MAPK1P28482 360 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 PIGAP37287 484 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 HNMTP50135 292 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 PTSQ03393 145 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 ZXDCQ2QGD7 858 aaPredicted RBP18.19■□□□□ 0.5
SHISA5-220ENST00000619810 ATP13A5Q4VNC0 1218 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 SPARTQ8N0X7 666 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 L3MBTL4Q8NA19 623 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 TBC1D15Q8TC07 691 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 CMTM7Q96FZ5 175 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 TMEM169Q96HH4 297 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 REXO5Q96IC2 774 aaKnown RBP18.19■□□□□ 0.5
SHISA5-220ENST00000619810 HHIPQ96QV1 700 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 HERC2P3Q9BVR0 1158 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 ELOVL6Q9H5J4 265 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 MRPL17Q9NRX2 175 aaKnown RBP18.19■□□□□ 0.5
SHISA5-220ENST00000619810 SCN5AQ14524 2016 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 NUAK1O60285 661 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 SERPINA1P01009 418 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 ACPPP15309 386 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 CD70P32970 193 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 TPD52P55327 224 aaPredicted RBP18.19■□□□□ 0.5
SHISA5-220ENST00000619810 NFATC3Q12968 1075 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 TOP3AQ13472 1001 aaPredicted RBP18.19■□□□□ 0.5
SHISA5-220ENST00000619810 C16orf72Q14CZ0 275 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 RFX4Q33E94 735 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 ZNF829Q3KNS6 432 aaPredicted RBP18.19■□□□□ 0.5
SHISA5-220ENST00000619810 ZC3H12BQ5HYM0 836 aaKnown RBP18.19■□□□□ 0.5
SHISA5-220ENST00000619810 MSANTD1Q6ZTZ1 278 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 USP45Q70EL2 814 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 RAB2BQ8WUD1 216 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 SNX19Q92543 992 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 HSPBAP1Q96EW2 488 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 PYURFQ96I23 114 aa18.19■□□□□ 0.5
SHISA5-220ENST00000619810 MCCC1Q96RQ3 725 aaPredicted RBP18.19■□□□□ 0.5
SHISA5-220ENST00000619810 hCG_2014768A0A024R1R8 64 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 SERTM1A2A2V5 107 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 HIST1H2AGP0C0S8 130 aaPredicted RBP18.18■□□□□ 0.5
SHISA5-220ENST00000619810 SRCP12931 536 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 IL7RP16871 459 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 HIST1H2ADP20671 130 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 SLC6A12P48065 614 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 CCL23P55773 120 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 ZDHHC20Q5W0Z9 365 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 GTF2IRD2BQ6EKJ0 949 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 GTF2IRD2Q86UP8 949 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 HIPK1Q86Z02 1210 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 BBS7Q8IWZ6 715 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 SLC39A11Q8N1S5 342 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 C10orf111Q8N326 155 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 ASB11Q8WXH4 323 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 HIST1H2AHQ96KK5 128 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 HIST1H2AJQ99878 128 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 H2AFJQ9BTM1 129 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 SUV39H2Q9H5I1 410 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 GPN2Q9H9Y4 310 aaPredicted RBP18.18■□□□□ 0.5
SHISA5-220ENST00000619810 KIAA1671Q9BY89 1806 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 LOC100130705A0A1B0GUX0 176 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 PARNO95453 639 aaKnown RBP18.18■□□□□ 0.5
SHISA5-220ENST00000619810 INHBBP09529 407 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 MPC1LP0DKB6 136 aa18.18■□□□□ 0.5
SHISA5-220ENST00000619810 SDC1P18827 310 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms