RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 NR6A1Q15406 480 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 LEXMQ3ZCV2 418 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 ATP6AP1LQ52LC2 224 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 TMEM31Q5JXX7 168 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 C11orf96Q7Z7L8 435 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 LRRTM4Q86VH4 590 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 FNDC5Q8NAU1 212 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 SPDYE1Q8NFV5 336 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 FBXL8Q96CD0 374 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 MTFMTQ96DP5 389 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 NTMT1Q9BV86 223 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 C1QTNF2Q9BXJ5 285 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 IL1RL2Q9HB29 575 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 DNAJC11Q9NVH1 559 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 NDE1Q9NXR1 346 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 ANGPTL2Q9UKU9 493 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 PSMD13Q9UNM6 376 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 PCDHGA7Q9Y5G6 932 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 DOCK9Q9BZ29 2069 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 ZFC3H1O60293 1989 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 KLHL33A6NCF5 533 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 MGAT4DA6NG13 374 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 E7ENX8 843 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 CLGNO14967 610 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 CLDN9O95484 217 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 SLC16A8O95907 504 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 SNRPB2P08579 225 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 NDUFV2P19404 249 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 MLLT1Q03111 559 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 NAE1Q13564 534 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 TDGQ13569 410 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 LRP8Q14114 963 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 AGTRAPQ6RW13 159 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 AMZ2Q86W34 360 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 HORMAD1Q86X24 394 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 MIER2Q8N344 545 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 ASB12Q8WXK4 309 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 N4BP2L2Q92802 583 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 RSRC1Q96IZ7 334 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 CCDC138Q96M89 665 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 PKP4Q99569 1192 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 C1QTNF7Q9BXJ2 289 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 TEX101Q9BY14 249 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 PREBQ9HCU5 417 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 PHPT1Q9NRX4 125 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 STOX2Q9P2F5 926 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 SLC23A2Q9UGH3 650 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 TRPS1Q9UHF7 1281 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 MOSPD1Q9UJG1 213 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 PRPF19Q9UMS4 504 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 ST14Q9Y5Y6 855 aa12.36□□□□□ -0.43
TNFAIP3-209ENST00000619035 ULK1O75385 1050 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 C1orf105O95561 183 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 GCKP35557 465 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 HALP42357 657 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 PFN3P60673 137 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 PSME3P61289 254 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 YBX1P67809 324 aaKnown RBP12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 CCINQ13939 588 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 MAPRE2Q15555 327 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 VPS26BQ4G0F5 336 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 TMEM259Q4ZIN3 620 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 HABP4Q5JVS0 413 aaKnown RBP12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 LPCAT4Q643R3 524 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 XKR5Q6UX68 686 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 Q6ZSR9 355 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 Q7L0L9 218 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 CHST15Q7LFX5 561 aaPredicted RBP12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 RETREG3Q86VR2 466 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 RASGRP3Q8IV61 690 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 HMGB4Q8WW32 186 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 ATL1Q8WXF7 558 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 TEX37Q96LM6 180 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 CCT7Q99832 543 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 ZNF490Q9ULM2 529 aaPredicted RBP12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 DNMT3AQ9Y6K1 912 aaPredicted RBP12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 MYO10Q9HD67 2058 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 SHISA7A6NL88 538 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 H3BNX3 289 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 MRASO14807 208 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 FKBP6O75344 327 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 IDO1P14902 403 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 IMPA1P29218 277 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 IGFALSP35858 605 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 ATP4BP51164 291 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 MRPS22P82650 360 aaKnown RBP12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 FLOT2Q14254 428 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 IMPG1Q17R60 797 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 C6orf136Q5SQH8 315 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 Q6ZS52 159 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 THOC6Q86W42 341 aaKnown RBP12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 SFRP1Q8N474 314 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 LMNTD1Q8N9Z9 388 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 TRIM8Q9BZR9 551 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 PCDHAC1Q9H158 963 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 INTS7Q9NVH2 962 aaKnown RBP12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 ASF1AQ9Y294 204 aa12.35□□□□□ -0.43
TNFAIP3-209ENST00000619035 MANBAO00462 879 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 SCAMP1O15126 338 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 MAP3K7O43318 606 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms