RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 GON4LQ3T8J9 2241 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 TRPM6Q9BX84 2022 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 ARHGEF33A8MVX0 844 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 SLC28A1O00337 649 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 C1QCP02747 245 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 CBSLP0DN79 551 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 HRH2P25021 359 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 CBSP35520 551 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 IRF8Q02556 426 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 BNIP2Q12982 314 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.08□□□□□ -0.48
CIITA-212ENST00000618207 FAM78AQ5JUQ0 283 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 PSRC1Q6PGN9 363 aaPredicted RBP12.08□□□□□ -0.48
CIITA-212ENST00000618207 GCNT7Q6ZNI0 430 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 ERMP1Q7Z2K6 904 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 TRAPPC5Q8IUR0 188 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 CELF5Q8N6W0 485 aaKnown RBP12.08□□□□□ -0.48
CIITA-212ENST00000618207 FBXO30Q8TB52 745 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 SP7Q8TDD2 431 aaPredicted RBP12.08□□□□□ -0.48
CIITA-212ENST00000618207 BTN2A2Q8WVV5 523 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 HPS4Q9NQG7 708 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 ZNF197O14709 1029 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 AHCYL1O43865 530 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 NUAK1O60285 661 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 KCNH1O95259 989 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 FGF19O95750 216 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 CISD3P0C7P0 127 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 PFKLP17858 780 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 FASP25445 335 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 PTPN5P54829 565 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 MYBPC1Q00872 1141 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 SFSWAPQ12872 951 aaKnown RBP12.08□□□□□ -0.48
CIITA-212ENST00000618207 GRIK2Q13002 908 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 GPM6BQ13491 265 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 DMC1Q14565 340 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 PYCR3Q53H96 274 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 XKR6Q5GH73 641 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 C9orf50Q5SZB4 431 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 OTUD3Q5T2D3 398 aaPredicted RBP12.08□□□□□ -0.48
CIITA-212ENST00000618207 THEMIS2Q5TEJ8 643 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 RAET1GQ6H3X3 334 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 LCN8Q6JVE9 175 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 CRTC3Q6UUV7 619 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 CYP2U1Q7Z449 544 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 MMAAQ8IVH4 418 aaKnown RBP12.08□□□□□ -0.48
CIITA-212ENST00000618207 DTWD1Q8N5C7 304 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 VN1R2Q8NFZ6 395 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 GLYATL1Q969I3 302 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 BIRC7Q96CA5 298 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 OR2AG1Q9H205 316 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 TRPS1Q9UHF7 1281 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 RAB26Q9ULW5 256 aa12.08□□□□□ -0.48
CIITA-212ENST00000618207 LRRK1Q38SD2 2015 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 TBC1D3BA6NDS4 549 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 CCDC160A6NGH7 325 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 SLC9A3R1O14745 358 aaPredicted RBP12.07□□□□□ -0.48
CIITA-212ENST00000618207 FESP07332 822 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 C8GP07360 202 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 PHC1P78364 1004 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 ANKRD26P1Q6NSI1 321 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 ERAP2Q6P179 960 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 EPHX4Q8IUS5 362 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 CFAP206Q8IYR0 622 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 ARL10Q8N8L6 244 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 TSPEARQ8WU66 669 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 ZUFSPQ96AP4 578 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 NSMCE2Q96MF7 247 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 CAAP1Q9H8G2 361 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 DNAJC11Q9NVH1 559 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 AQP12BA6NM10 295 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 E7EQ34 232 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 WNT9AO14904 365 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 AREL1O15033 823 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 DENRO43583 198 aaKnown RBP12.07□□□□□ -0.48
CIITA-212ENST00000618207 LZTS3O60299 673 aaPredicted RBP12.07□□□□□ -0.48
CIITA-212ENST00000618207 SLC16A8O95907 504 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 ENO2P09104 434 aaPredicted RBP12.07□□□□□ -0.48
CIITA-212ENST00000618207 GNAO1P09471 354 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 ZNF24P17028 368 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 MMP12P39900 470 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 PFN3P60673 137 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 RPS14P62263 151 aaKnown RBP12.07□□□□□ -0.48
CIITA-212ENST00000618207 STARD3Q14849 445 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 COQ5Q5HYK3 327 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 KRT80Q6KB66 452 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 DOK6Q6PKX4 331 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 AQP12AQ8IXF9 295 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 MARVELD2Q8N4S9 558 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 FAM86B1Q8N7N1 296 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 OSCP1Q8WVF1 389 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 GTF2H4Q92759 462 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 FGF13Q92913 245 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 USP7Q93009 1102 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 INPP5KQ9BT40 448 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 ZSCAN5AQ9BUG6 496 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 GRIP2Q9C0E4 1043 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 DEC1Q9P2X7 70 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 ANAPC2Q9UJX6 822 aa12.07□□□□□ -0.48
CIITA-212ENST00000618207 MAGED1Q9Y5V3 778 aaPredicted RBP12.07□□□□□ -0.48
CIITA-212ENST00000618207 GSTA4O15217 222 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms