RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 STX16-NPEPL1H3BU86 382 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 STX16O14662 325 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC22A2O15244 555 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 NDUFS4O43181 175 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ERI3O43414 337 aaKnown RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 KCNJ13O60928 360 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SMNDC1O75940 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 HLA-DQA2P01906 255 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PRPS1L1P21108 318 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 MPIP34949 423 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 IDH3AP50213 366 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 CACNA2D1P54289 1103 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 NIPAL4Q0D2K0 466 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PTCHD3Q3KNS1 767 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 EPHX4Q8IUS5 362 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 DEPDC4Q8N2C3 294 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ROPN1LQ96C74 230 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 RMND5BQ96G75 393 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC35G5Q96KT7 338 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 BTBD9Q96Q07 612 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 MGME1Q9BQP7 344 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 DUSP26Q9BV47 211 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 TMEM245Q9H330 911 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 DNMT3BQ9UBC3 853 aaKnown RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SERTAD3Q9UJW9 196 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PPM1HQ9ULR3 514 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ELOVL7A1L3X0 281 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 MYL12BO14950 172 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 UGT2B17O75795 530 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 SIX3O95343 332 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 HSMCR30P0CW71 290 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 CSNK2A2P19784 350 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 HOXC13P31276 330 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 SOX6P35712 828 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 RFX4Q33E94 735 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 APLFQ8IW19 511 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 TDHQ8IZJ6 230 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 GJD3Q8N144 294 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 FBXW8Q8N3Y1 598 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 PNPT1Q8TCS8 783 aaKnown RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 RIT1Q92963 219 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 ISG20Q96AZ6 181 aaKnown RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 SCRN2Q96FV2 425 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 Q96MT0 163 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 TRIB3Q96RU7 358 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC17A9Q9BYT1 436 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 MVB12BQ9H7P6 319 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 RC3H2Q9HBD1 1191 aaKnown RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 ARL8BQ9NVJ2 186 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 HCN3Q9P1Z3 774 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 EGFL7Q9UHF1 273 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 PCDHGA2Q9Y5H1 932 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 RREB1Q92766 1687 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 COL24A1Q17RW2 1714 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 DOCK2Q92608 1830 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 EBLN1P0CF75 366 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 CHRM1P11229 460 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF24P17028 368 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 HRH2P25021 359 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 IL12BP29460 328 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 IDH2P48735 452 aaKnown RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 KHKP50053 298 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 DEFA1P59665 94 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 DEFA3P59666 94 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 RAB6CQ53S08 254 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 FAM182AQ5T1J6 154 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 NIPAL1Q6NVV3 410 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 C8orf59Q8N0T1 100 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 PGAM4Q8N0Y7 254 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 MAGEE2Q8TD90 523 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC13A3Q8WWT9 602 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 ZDHHC12Q96GR4 267 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 RAB6CQ9H0N0 254 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 LRMDAQ9H2I8 198 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF334Q9HCZ1 680 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 PHF11Q9UIL8 331 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 LYVE1Q9Y5Y7 322 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 C2orf74A8MZ97 194 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 DLX3O60479 287 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 TGFB1P01137 390 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 TFPIP10646 304 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 SPINT3P49223 89 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 CLCN4P51793 760 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 HNRNPA1L2Q32P51 320 aaKnown RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 C10orf62Q5T681 223 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 REP15Q6BDI9 236 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 GLYATQ6IB77 296 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 TMIGD1Q6UXZ0 262 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 COMMD2Q86X83 199 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 TBC1D21Q8IYX1 336 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 ZDHHC14Q8IZN3 488 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 PLEKHG4BQ96PX9 1271 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 PRRG4Q9BZD6 226 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 STRADBQ9C0K7 418 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 TMED5Q9Y3A6 229 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 FAM234BA2RU67 622 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 JUNDP17535 347 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 GSTM5P46439 218 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 TOP3AQ13472 1001 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 SHHQ15465 462 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms