RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SLC41A2Q96JW4 573 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 PPP1R2P1Q96PQ5 205 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 TAAR9Q96RI9 348 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 MRM3Q9HC36 420 aaKnown RBP5.5□□□□□ -1.53
CPNE3-208ENST00000614678 XAB2Q9HCS7 855 aaKnown RBP5.5□□□□□ -1.53
CPNE3-208ENST00000614678 SSUH2Q9Y2M2 353 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 MRFAP1Q9Y605 127 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 DNMT3AQ9Y6K1 912 aaPredicted RBP5.5□□□□□ -1.53
CPNE3-208ENST00000614678 HMX2A2RU54 273 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 CDC7O00311 574 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 FAM153BP0C7A2 387 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 CDK4P11802 303 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 MLNP12872 115 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 EFNA3P52797 238 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 EPHA4P54764 986 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 SRSF11Q05519 484 aaKnown RBP5.5□□□□□ -1.53
CPNE3-208ENST00000614678 BMPR2Q13873 1038 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 FAM153CQ494X1 144 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 CRYBG3Q68DQ2 2970 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 ADNP2Q6IQ32 1131 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 C16orf46Q6P387 395 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 SPESP1Q6UW49 350 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 ZBTB2Q8N680 514 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 IL22RA1Q8N6P7 574 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 LRRC45Q96CN5 670 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 SGSM3Q96HU1 749 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.5□□□□□ -1.53
CPNE3-208ENST00000614678 SPNS1Q9H2V7 528 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 STN1Q9H668 368 aaKnown RBP5.5□□□□□ -1.53
CPNE3-208ENST00000614678 SLC6A20Q9NP91 592 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 ZDHHC18Q9NUE0 388 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 GNPTGQ9UJJ9 305 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 CDC23Q9UJX2 597 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 CROTQ9UKG9 612 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 RIMKLBQ9ULI2 386 aa5.5□□□□□ -1.53
CPNE3-208ENST00000614678 MRPS2Q9Y399 296 aaKnown RBP5.5□□□□□ -1.53
CPNE3-208ENST00000614678 TCRBV9S1A1TA0A576 114 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 E5RI56 91 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 LIN7AO14910 233 aaPredicted RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 HGSO14964 777 aaPredicted RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 PRICKLE3O43900 615 aaPredicted RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 AP2A2O94973 939 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 MATN4O95460 622 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 GUCA1CO95843 209 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 ITGAXP20702 1163 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 OAS2P29728 719 aaKnown RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 GDF5P43026 501 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 TAS2R39P59534 338 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 IL10RAQ13651 578 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 MORF4L2Q15014 288 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 KYNUQ16719 465 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 LINC00303Q3SY05 128 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 DCAF12Q5T6F0 453 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 MRNIPQ6NTE8 343 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 PRSS41Q7RTY9 318 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 OOSP2Q86WS3 158 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 CACNA2D3Q8IZS8 1091 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 CACTIN-AS1Q8N1I8 211 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 ZNF655Q8N720 491 aaPredicted RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 ASZ1Q8WWH4 475 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 AARSD1Q9BTE6 412 aaKnown RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 CARD6Q9BX69 1037 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 MAU2Q9Y6X3 613 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 RAD1O60671 282 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 RHOXF2BP0C7M4 288 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 CBSLP0DN79 551 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 PKLRP30613 574 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 CBSP35520 551 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 DLG1Q12959 904 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 RAPSNQ13702 412 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 NAA30Q147X3 362 aaPredicted RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 KBTBD12Q3ZCT8 623 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 NLRP9Q7RTR0 991 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 STRA8Q7Z7C7 330 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 D2HGDHQ8N465 521 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 ZNF740Q8NDX6 193 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 OR2A1Q8NGT9 310 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 ZNF480Q8WV37 535 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 IFT81Q8WYA0 676 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 CCNL2Q96S94 520 aaPredicted RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 RHOXF2Q9BQY4 288 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 TRIM55Q9BYV6 548 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 TRIT1Q9H3H1 467 aaKnown RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 SLC22A11Q9NSA0 550 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 MOCS1Q9NZB8 636 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 V9GYY5 206 aaPredicted RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 SVILO95425 2214 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 DOCK10Q96BY6 2186 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 A0A0J9YVX5 310 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 FEZF1A0PJY2 475 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 NCF1BA6NI72 391 aaPredicted RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 NCF1CA8MVU1 366 aaPredicted RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 E7ESA3 106 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 STMND1H3BQB6 276 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 RRP8O43159 456 aaKnown RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 ZNF749O43361 778 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 KATNA1O75449 491 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 DLGAP3O95886 979 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 APOA4P06727 396 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms