RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 DENND5AQ6IQ26 1287 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 ZNF544Q6NX49 715 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 ISCA2Q86U28 154 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 NPWQ8N729 165 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 ST13P5Q8NFI4 369 aaPredicted RBP21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 OR52E4Q8NGH9 312 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 LGALS12Q96DT0 336 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 ARPC5LQ9BPX5 153 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 UBP1Q9NZI7 540 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 MRPS23Q9Y3D9 190 aaKnown RBP21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 ANAPC1Q9H1A4 1944 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 FAM234BA2RU67 622 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 PTGES3LE9PB15 166 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 COCHO43405 550 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 SNX4O95219 450 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 HOXB8P17481 243 aaPredicted RBP21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 CEBPBP17676 345 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 HOXD11P31277 338 aaPredicted RBP21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 PIGAP37287 484 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 EPHA5P54756 1037 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 ZNF404Q494X3 552 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 PRSS36Q5K4E3 855 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 ARL14EPQ8N8R7 260 aaPredicted RBP21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 OR5K1Q8NHB7 308 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 ANGPTL6Q8NI99 470 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 OVCA2Q8WZ82 227 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 MRPS31Q92665 395 aaKnown RBP21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 MSLNLQ96KJ4 702 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 NUSAP1Q9BXS6 441 aaKnown RBP21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 PCDHGA10Q9Y5H3 936 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 OBSL1O75147 1896 aa21.45■■□□□ 1.02
POLR2J3-220ENST00000613744 AXIN1O15169 862 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 SLC22A3O75751 556 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 POLR2JP52435 117 aaKnown RBP21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 DEFA1P59665 94 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 DEFA3P59666 94 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 PRKCDQ05655 676 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 CLCA4Q14CN2 919 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 HECTD3Q5T447 861 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 CES5AQ6NT32 575 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 TRIM63Q969Q1 353 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 RPL10LQ96L21 214 aaKnown RBP21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 ALOXE3Q9BYJ1 711 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 SMG9Q9H0W8 520 aaKnown RBP21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 SMOC2Q9H3U7 446 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 WDCPQ9H6R7 721 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 ALG9Q9H6U8 611 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 WDR6Q9NNW5 1121 aaKnown RBP21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 SMPD4Q9NXE4 827 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 SCN3BQ9NY72 215 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 SLCO3A1Q9UIG8 710 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 ERVW-1Q9UQF0 538 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 ORC6Q9Y5N6 252 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 IFRD1O00458 451 aaPredicted RBP21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 ANGPTL1O95841 491 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 HMBSP08397 361 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 GNG2P59768 71 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 SLC35A2P78381 396 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 COL19A1Q14993 1142 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 EML3Q32P44 896 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 GPR158Q5T848 1215 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 DESI1Q6ICB0 168 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 GET4Q7L5D6 327 aaPredicted RBP21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 C11orf74Q86VG3 221 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 DTWD1Q8N5C7 304 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 BHMTQ93088 406 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 ZSWIM3Q96MP5 696 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 TMEM74Q96NL1 305 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 CDK5RAP1Q96SZ6 601 aaKnown RBP21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 TUBB1Q9H4B7 451 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 SMURF2Q9HAU4 748 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 V9GYQ6 96 aa21.44■■□□□ 1.02
POLR2J3-220ENST00000613744 METTL15A6NJ78 407 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 FAM72CH0Y354 149 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 ADRA1AP35348 466 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 ATAT1Q5SQI0 421 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 FAM72AQ5TYM5 149 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 FAM72DQ6L9T8 149 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 FAM72BQ86X60 149 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 ANKRD49Q8WVL7 239 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 ZHX1-C8orf76Q96EF9 292 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 PGAP3Q96FM1 320 aaPredicted RBP21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 SLC46A2Q9BY10 475 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 TRIM8Q9BZR9 551 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 TKTL2Q9H0I9 626 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 SLC2A6Q9UGQ3 507 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 H3BMM5 538 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 HAT1O14929 419 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 IRAK2O43187 625 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 F9P00740 461 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 PPP3CCP48454 512 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 NCS1P62166 190 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 TRAF3Q13114 568 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 NPTX1Q15818 432 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 ADHFE1Q8IWW8 467 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 EID3Q8N140 333 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 FICDQ9BVA6 458 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 NXF2Q9GZY0 626 aaKnown RBP21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 OPTCQ9UBM4 332 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 GIMAP2Q9UG22 337 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms