RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 CALHM3Q86XJ0 350 aa16.55■□□□□ 0.24
TNIP1-220ENST00000610535 CLIP4Q8N3C7 705 aa16.55■□□□□ 0.24
TNIP1-220ENST00000610535 TTC29Q8NA56 475 aaPredicted RBP16.55■□□□□ 0.24
TNIP1-220ENST00000610535 CTRCQ99895 268 aa16.55■□□□□ 0.24
TNIP1-220ENST00000610535 SPATA7Q9P0W8 599 aa16.55■□□□□ 0.24
TNIP1-220ENST00000610535 ANGPTL3Q9Y5C1 460 aa16.55■□□□□ 0.24
TNIP1-220ENST00000610535 ULK1O75385 1050 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 UPK1BO75841 260 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 SPNP16150 400 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 HOXC8P31273 242 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 CDKN2CP42773 168 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 ZNF157P51786 506 aaPredicted RBP16.54■□□□□ 0.24
TNIP1-220ENST00000610535 SLC14A1Q13336 389 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 ATG9BQ674R7 924 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 ALG1LQ6GMV1 187 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 CCDC71Q8IV32 467 aaPredicted RBP16.54■□□□□ 0.24
TNIP1-220ENST00000610535 POC5Q8NA72 575 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 EFHD2Q96C19 240 aaPredicted RBP16.54■□□□□ 0.24
TNIP1-220ENST00000610535 PSKH2Q96QS6 385 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 CPPED1Q9BRF8 314 aaPredicted RBP16.54■□□□□ 0.24
TNIP1-220ENST00000610535 DCSTAMPQ9H295 470 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 FBXO44Q9H4M3 255 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 LRTM1Q9HBL6 345 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 ITM2CQ9NQX7 267 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.54■□□□□ 0.241e-6■■□□□ 11.4
TNIP1-220ENST00000610535 PADI3Q9ULW8 664 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 VPS9D1Q9Y2B5 631 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 KCNK2O95069 426 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 DLGAP3O95886 979 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 S100BP04271 92 aaPredicted RBP16.54■□□□□ 0.24
TNIP1-220ENST00000610535 TACR2P21452 398 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 HOXA9P31269 272 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 KRT20P35900 424 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 CACHD1Q5VU97 1274 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 STEAP3Q658P3 488 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 PLPP6Q8IY26 295 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 TRIB2Q92519 343 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 FBXO32Q969P5 355 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 EGFL8Q99944 293 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 SERHLQ9NQF3 203 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 PDP1Q9P0J1 537 aaPredicted RBP16.54■□□□□ 0.24
TNIP1-220ENST00000610535 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.54■□□□□ 0.246e-7■■■■□ 26.5
TNIP1-220ENST00000610535 DHRS7Q9Y394 339 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 MOXD2PA6NHM9 499 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 A6NL46 340 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 FAM220BPB1ANY3 271 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 H0Y626 953 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 TRIM16O95361 564 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 BCKDHAP12694 445 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 LIPAP38571 399 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 MAPKAPK2P49137 400 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 TAF10Q12962 218 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 MAD2L1BPQ15013 274 aaPredicted RBP16.54■□□□□ 0.24
TNIP1-220ENST00000610535 PRSS36Q5K4E3 855 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 KDM4DQ6B0I6 523 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 OR2T5Q6IEZ7 315 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 GDF6Q6KF10 455 aaPredicted RBP16.54■□□□□ 0.24
TNIP1-220ENST00000610535 RAVER1Q8IY67 606 aaKnown RBP16.54■□□□□ 0.24
TNIP1-220ENST00000610535 FAM83FQ8NEG4 500 aaPredicted RBP16.54■□□□□ 0.24
TNIP1-220ENST00000610535 OR2T29Q8NH02 315 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 CAPSLQ8WWF8 208 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 TNKS2Q9H2K2 1166 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 CCSER2Q9H7U1 834 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 NMRK2Q9NPI5 230 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 THG1LQ9NWX6 298 aaKnown RBP16.54■□□□□ 0.24
TNIP1-220ENST00000610535 OPTCQ9UBM4 332 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 DLGAP4Q9Y2H0 992 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 RAI2Q9Y5P3 530 aa16.54■□□□□ 0.24
TNIP1-220ENST00000610535 ANKRD66B4E2M5 251 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 LOC730098B7Z3J9 87 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 PGLSO95336 258 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 PRAMEF12O95522 483 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 GTF2E2P29084 291 aaKnown RBP16.53■□□□□ 0.24
TNIP1-220ENST00000610535 CLK1P49759 484 aaKnown RBP16.53■□□□□ 0.24
TNIP1-220ENST00000610535 CLCN4P51793 760 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 CXCL17Q6UXB2 119 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 SNX20Q7Z614 316 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 GLB1L3Q8NCI6 653 aaPredicted RBP16.53■□□□□ 0.24
TNIP1-220ENST00000610535 KATNAL1Q9BW62 490 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 CIPCQ9C0C6 399 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 C6orf62Q9GZU0 229 aaPredicted RBP16.53■□□□□ 0.24
TNIP1-220ENST00000610535 ABCG8Q9H221 673 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 UBA2Q9UBT2 640 aaPredicted RBP16.53■□□□□ 0.24
TNIP1-220ENST00000610535 GREB1Q4ZG55 1949 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 SNPHO15079 494 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 RAD51BO15315 384 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 ESR1P03372 595 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 SLC6A4P31645 630 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 CA5AP35218 305 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 PTGER3P43115 390 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 CXCR4P61073 352 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 CREMQ03060 361 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 KEAP1Q14145 624 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 USP39Q53GS9 565 aaKnown RBP16.53■□□□□ 0.24
TNIP1-220ENST00000610535 VTCN1Q7Z7D3 282 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 ADAMTSL2Q86TH1 951 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 AKAP14Q86UN6 197 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 CLDN19Q8N6F1 224 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 APOL4Q9BPW4 351 aa16.53■□□□□ 0.24
TNIP1-220ENST00000610535 AGO1Q9UL18 857 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms