RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SNX8Q9Y5X2 465 aa19.94■□□□□ 0.78
SSBP3-216ENST00000610401 HTR3EA5X5Y0 456 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 PSMD11O00231 422 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 RAD51BO15315 384 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 RGS14O43566 566 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 CNOT3O75175 753 aaKnown RBP19.93■□□□□ 0.78
SSBP3-216ENST00000610401 CLDN7O95471 211 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 DAPP51397 102 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 HORMAD1Q86X24 394 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 TNKS2Q9H2K2 1166 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 RUBCNLQ9H714 662 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 NMRK2Q9NPI5 230 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 PCDHGA10Q9Y5H3 936 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 AQP9O43315 295 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 KLKB1P03952 638 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 CLCA4Q14CN2 919 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 UAP1L1Q3KQV9 507 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 CLLU1OSQ5K130 101 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 ZNF362Q5T0B9 420 aaPredicted RBP19.93■□□□□ 0.78
SSBP3-216ENST00000610401 ZHX1-C8orf76Q96EF9 292 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 REXO5Q96IC2 774 aaKnown RBP19.93■□□□□ 0.78
SSBP3-216ENST00000610401 PSKH2Q96QS6 385 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 TSPAN18Q96SJ8 248 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 IQCA1LA6NCM1 817 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 PCMT1P22061 227 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 HTR7P34969 479 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 RHOAP61586 193 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 OXA1LQ15070 435 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 SPATC1Q76KD6 591 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 DPP10Q8N608 796 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 TTC29Q8NA56 475 aaPredicted RBP19.93■□□□□ 0.78
SSBP3-216ENST00000610401 GOLM1Q8NBJ4 401 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 PIK3C3Q8NEB9 887 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 FAM83FQ8NEG4 500 aaPredicted RBP19.93■□□□□ 0.78
SSBP3-216ENST00000610401 CAPSLQ8WWF8 208 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 ARHGAP39Q9C0H5 1083 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 HEBP1Q9NRV9 189 aa19.93■□□□□ 0.78
SSBP3-216ENST00000610401 SOBPA7XYQ1 873 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 RFXANKO14593 260 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 UGT2B4P06133 528 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 MSH3P20585 1137 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 CLK3P49761 638 aaKnown RBP19.92■□□□□ 0.78
SSBP3-216ENST00000610401 ZNF691Q5VV52 312 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 FAM180BQ6P0A1 224 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 RFLNAQ6ZTI6 216 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 TAS1R1Q7RTX1 841 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 ZNF551Q7Z340 670 aaPredicted RBP19.92■□□□□ 0.78
SSBP3-216ENST00000610401 LMNTD1Q8N9Z9 388 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 YTHDF1Q9BYJ9 559 aaKnown RBP19.92■□□□□ 0.78
SSBP3-216ENST00000610401 PDFQ9HBH1 243 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 ARL15Q9NXU5 204 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 IGLV3-10A0A075B6K4 115 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 ADAM12O43184 909 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 PDYNP01213 254 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 NUDT7P0C024 238 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 CORO1AP31146 461 aaKnown RBP19.92■□□□□ 0.78
SSBP3-216ENST00000610401 VLDLRP98155 873 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 GALNT7Q86SF2 657 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 RTN4RL1Q86UN2 441 aaPredicted RBP19.92■□□□□ 0.78
SSBP3-216ENST00000610401 TMEM173Q86WV6 379 aaPredicted RBP19.92■□□□□ 0.78
SSBP3-216ENST00000610401 LSRQ86X29 649 aaPredicted RBP19.92■□□□□ 0.78
SSBP3-216ENST00000610401 OR5K1Q8NHB7 308 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 MCFD2Q8NI22 146 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 MGME1Q9BQP7 344 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 POPDC3Q9HBV1 291 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 TAS2R16Q9NYV7 291 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 CRLS1Q9UJA2 301 aa19.92■□□□□ 0.78
SSBP3-216ENST00000610401 PFDN6O15212 129 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 ALOX12P18054 663 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 NFE2Q16621 373 aaPredicted RBP19.91■□□□□ 0.78
SSBP3-216ENST00000610401 BEND5Q7L4P6 421 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 CLECL1Q8IZS7 167 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 CACTIN-AS1Q8N1I8 211 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 TSPEARQ8WU66 669 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 LGALS12Q96DT0 336 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 PPP3R2Q96LZ3 170 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 KAT8Q9H7Z6 458 aaKnown RBP19.91■□□□□ 0.78
SSBP3-216ENST00000610401 DCAF13Q9NV06 445 aaKnown RBP19.91■□□□□ 0.78
SSBP3-216ENST00000610401 COQ9O75208 318 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 CYP7B1O75881 506 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 CD6P30203 668 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 PCYT1AP49585 367 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 YBEYP58557 167 aaPredicted RBP19.91■□□□□ 0.78
SSBP3-216ENST00000610401 CREMQ03060 361 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 KCNJ8Q15842 424 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 DGUOKQ16854 277 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 PRSS36Q5K4E3 855 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 IRAK1BP1Q5VVH5 260 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 KCNJ9Q92806 393 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 TADA1Q96BN2 335 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 MTERF1Q99551 399 aaKnown RBP19.91■□□□□ 0.78
SSBP3-216ENST00000610401 ADGRE3Q9BY15 652 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 C1orf109Q9NX04 203 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 CD84Q9UIB8 345 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 A8MV72 311 aaPredicted RBP19.91■□□□□ 0.78
SSBP3-216ENST00000610401 IFRD1O00458 451 aaPredicted RBP19.91■□□□□ 0.78
SSBP3-216ENST00000610401 ACSL4O60488 711 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 JUNBP17275 347 aaPredicted RBP19.91■□□□□ 0.78
SSBP3-216ENST00000610401 ST13P50502 369 aaKnown RBP19.91■□□□□ 0.78
SSBP3-216ENST00000610401 BOP1Q14137 746 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms