RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 DCAF10Q5QP82 559 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 TRMT1LQ7Z2T5 733 aaKnown RBP3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 GALNTL5Q7Z4T8 443 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 TLK2Q86UE8 772 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 NUDT13Q86X67 352 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 TMEM139Q8IV31 216 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 THAP8Q8NA92 274 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 SETD6Q8TBK2 473 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 LRRC8CQ8TDW0 803 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 GRHL3Q8TE85 626 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 TM9SF4Q92544 642 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 NR4A3Q92570 626 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 EXT2Q93063 718 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 RMDN2Q96LZ7 410 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 NODALQ96S42 347 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 MGME1Q9BQP7 344 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 CDH20Q9HBT6 801 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 SH3GLB2Q9NR46 395 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 ZNF701Q9NV72 531 aaPredicted RBP3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 SPHK1Q9NYA1 384 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 CACNG4Q9UBN1 327 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 ZDHHC2Q9UIJ5 367 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 DAPK2Q9UIK4 370 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 A0A1W2PN81 502 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 ARHGEF37A1IGU5 675 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 DNM1LO00429 736 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 PLOD2O00469 737 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 AP5Z1O43299 807 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 PRKRAO75569 313 aaKnown RBP3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 SLC22A3O75751 556 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 ZNF432O94892 652 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 TSHBP01222 138 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 PTMAP06454 111 aaKnown RBP3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 SAGP10523 405 aaPredicted RBP3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 LIFP15018 202 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 CDC25CP30307 473 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 PTGER4P35408 488 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 CHRNA7P36544 502 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 POU5F1Q01860 360 aaKnown RBP3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 ITPRIPL2Q3MIP1 535 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 MCMDC2Q4G0Z9 681 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 CCDC184Q52MB2 194 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 ZC2HC1CQ53FD0 456 aaPredicted RBP3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 TRAT1Q6PIZ9 186 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 METTL23Q86XA0 190 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 CDK20Q8IZL9 346 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 STPG4Q8N801 248 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 OR11H4Q8NGC9 324 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 OLIG1Q8TAK6 271 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 UHRF2Q96PU4 802 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 FERMT1Q9BQL6 677 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 MIS12Q9H081 205 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 FZD8Q9H461 694 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 POLLQ9UGP5 575 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 TMED3Q9Y3Q3 217 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 NOTCH3Q9UM47 2321 aa3.94□□□□□ -1.78
SMCHD1-213ENST00000609587 ANKRD61A6NGH8 418 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 ANXA2P2A6NMY6 339 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 CLIC2O15247 247 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 CIDEAO60543 219 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 CSN3P07498 182 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 GLULP15104 373 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 CA4P22748 312 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 TCEA1P23193 301 aaKnown RBP3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 CAPZA1P52907 286 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 ROR1Q01973 937 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 ZNF415Q09FC8 603 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 ITGA7Q13683 1181 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 VEZF1Q14119 521 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 TAF13Q15543 124 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 ODF4Q2M2E3 257 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 UGT3A2Q3SY77 523 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 SPDYCQ5MJ68 293 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 SFMBT2Q5VUG0 894 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 SLC35E4Q6ICL7 350 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 SHQ1Q6PI26 577 aaKnown RBP3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 DCLRE1AQ6PJP8 1040 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 RBMS3Q6XE24 437 aaKnown RBP3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 C11orf57Q6ZUT1 292 aaPredicted RBP3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 ISCA2Q86U28 154 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 TMEM143Q96AN5 459 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 RAD9AQ99638 391 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 URM1Q9BTM9 101 aaKnown RBP3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 KATNB1Q9BVA0 655 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 LAT2Q9GZY6 243 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 SDR39U1Q9NRG7 319 aaPredicted RBP3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 CHCHD3Q9NX63 227 aaKnown RBP3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 TRIM17Q9Y577 477 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 RPGRIP1LQ68CZ1 1315 aa3.93□□□□□ -1.78
SMCHD1-213ENST00000609587 DOCK7Q96N67 2140 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 LOC101059948A0A1B0GTJ6 334 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 NTN3O00634 580 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 WDR46O15213 610 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 IRF2P14316 349 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 PDGFRAP16234 1089 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 EPCAMP16422 314 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 EFNA1P20827 205 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 PSMA3P25788 255 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms