RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 RASGRP3Q8IV61 690 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 RDH10Q8IZV5 341 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 Q8N1X5 172 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 WDTC1Q8N5D0 677 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 PARP16Q8N5Y8 322 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 PCDH20Q8N6Y1 951 aaKnown RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 RNF148Q8N7C7 305 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 PLD5Q8N7P1 536 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 KCTD6Q8NC69 237 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 SETD9Q8NE22 299 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZSWIM2Q8NEG5 633 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF555Q8NEP9 628 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZMIZ2Q8NF64 920 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ST13P5Q8NFI4 369 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 TTLQ8NG68 377 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 PSMA8Q8TAA3 256 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 MAGEE2Q8TD90 523 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 DCAF4Q8WV16 495 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ARNTL2Q8WYA1 636 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 HERVK_113Q902F9 699 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 SGCDQ92629 289 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 HTRA1Q92743 480 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 C18orf25Q96B23 403 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 NXNL1Q96CM4 212 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 GPRASP2Q96D09 838 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 OMA1Q96E52 524 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 CCDC126Q96EE4 140 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 MFSD3Q96ES6 412 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 AHCYL2Q96HN2 611 aaKnown RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 RADILQ96JH8 1075 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 CCDC17Q96LX7 622 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 RAD9AQ99638 391 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 CGRRF1Q99675 332 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 RBBP8Q99708 897 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 PELOQ9BRX2 385 aaKnown RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 TRMOQ9BU70 441 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 C1QTNF1Q9BXJ1 281 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 IDI2Q9BXS1 227 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ALOXE3Q9BYJ1 711 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 TRIM54Q9BYV2 358 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ING2Q9H160 280 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 C2orf40Q9H1Z8 148 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 PPA2Q9H2U2 334 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 RNPEPQ9H4A4 650 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 NTN4Q9HB63 628 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 TRIM39Q9HCM9 518 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 WDR6Q9NNW5 1121 aaKnown RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLC52A3Q9NQ40 469 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 WASH6PQ9NQA3 447 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 CHST12Q9NRB3 414 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ABCB10Q9NRK6 738 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 SNX15Q9NRS6 342 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 GKN1Q9NS71 199 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 IGSF5Q9NSI5 407 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ANKEF1Q9NU02 776 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 PLCXD1Q9NUJ7 323 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 DDX28Q9NUL7 540 aaKnown RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 MED9Q9NWA0 146 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 PAQR5Q9NXK6 330 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 NSMCE4AQ9NXX6 385 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 TAS2R9Q9NYW1 312 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 EHD3Q9NZN3 535 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 WARS2Q9UGM6 360 aaKnown RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 SFMBT1Q9UHJ3 866 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ATP6V1HQ9UI12 483 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 TLK1Q9UKI8 766 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 TRHDEQ9UKU6 1024 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ELF5Q9UKW6 265 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 INTS6Q9UL03 887 aaKnown RBP3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 AGTPBP1Q9UPW5 1226 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 BTBD3Q9Y2F9 522 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF175Q9Y473 711 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 PCDHGB6Q9Y5F9 930 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 KLK4Q9Y5K2 254 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 FKBP7Q9Y680 259 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 DGKBQ9Y6T7 804 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 WDR81Q562E7 1941 aa3.99□□□□□ -1.77
HMGB1P50-201ENST00000605814 SHANK3Q9BYB0 1731 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 DICER1Q9UPY3 1922 aaKnown RBP3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 A0A096LPK6 155 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 ATP6AP2A0A1C7CYW4 349 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 EFCAB10A6NFE3 127 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 ATP6V1G2-DDX39BF2Z307 99 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 H0YCG3 227 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 INO80B-WBP1J3KQ70 363 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 PDHXO00330 501 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLC1A7O00341 560 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 NME4O00746 187 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 STX16O14662 325 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 PLD2O14939 933 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 TFECO14948 347 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 STX7O15400 261 aaKnown RBP3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 TBX1O43435 398 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 B3GALNT1O75752 331 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLC22A5O76082 557 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 SNAPINO95295 136 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 NTSR2O95665 410 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 ASS1P00966 412 aaKnown RBP3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 AHSGP02765 367 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 C2P06681 752 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms