RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 NANOS3P60323 173 aaKnown RBP5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 EGR4Q05215 589 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 EEF1A2Q05639 463 aaKnown RBP5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 SRSF4Q08170 494 aaKnown RBP5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 ZNF155Q12901 538 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 VEZF1Q14119 521 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 SRSF7Q16629 238 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 MTX3Q5HYI7 312 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 TOR1AIP1Q5JTV8 583 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 ELFN2Q5R3F8 820 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 PXDC1Q5TGL8 231 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 COLCA1Q6ZS62 124 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 PTOV1Q86YD1 416 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 PGBD5Q8N414 524 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 HDDC3Q8N4P3 179 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 BMPERQ8N8U9 685 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 PRR26Q8N8Z3 221 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 L3MBTL4Q8NA19 623 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 THAP8Q8NA92 274 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 SPATA22Q8NHS9 363 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 RNF128Q8TEB7 428 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 FAM216AQ8WUB2 273 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 TAF4BQ92750 862 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 RUFY1Q96T51 708 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 SLC2A11Q9BYW1 496 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 VN1R1Q9GZP7 353 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 SNX25Q9H3E2 840 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 PRMT8Q9NR22 394 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 GKN1Q9NS71 199 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 PDRG1Q9NUG6 133 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 POT1Q9NUX5 634 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 DNAJC11Q9NVH1 559 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 HIF1ANQ9NWT6 349 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 SIX4Q9UIU6 781 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 HEG1Q9ULI3 1381 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 ZNF804BA4D1E1 1349 aa5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 PDS5AQ29RF7 1337 aaKnown RBP5.23□□□□□ -1.57
HMGB1P51-201ENST00000605166 TEX13DA0A0J9YY54 714 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 SLC9B1P1A6NJY1 282 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 ZNHIT1O43257 154 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 PRAF2O60831 178 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 KCNJ13O60928 360 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 RAD51DO75771 328 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 ATP6AP2O75787 350 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 SLC4A1P02730 911 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 DESP17661 470 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 GM2AP17900 193 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 SERPINB6P35237 376 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 RPL21P46778 160 aaKnown RBP5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 NPBWR1P48145 328 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 LUMP51884 338 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 CASP9P55211 416 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 BRWD1-AS2P59051 145 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 PRAMEF8Q5VWM4 474 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 PIM3Q86V86 326 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 NUDT13Q86X67 352 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 CFAP206Q8IYR0 622 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 MRPL43Q8N983 215 aaKnown RBP5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 RASGEF1AQ8N9B8 481 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 RDM1Q8NG50 284 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 PANX3Q96QZ0 392 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 NEURL2Q9BR09 285 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 ATG101Q9BSB4 218 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 PRRG4Q9BZD6 226 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 ARRDC1-AS1Q9H2J1 176 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 GSN-AS1Q9NRJ2 163 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 SMARCAL1Q9NZC9 954 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 ZNF224Q9NZL3 707 aa5.22□□□□□ -1.57
HMGB1P51-201ENST00000605166 ARHGEF17Q96PE2 2063 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 IGLV5-52A0A0A0MRZ9 124 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 ILVBLA1L0T0 632 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 RNASEH1O60930 286 aaKnown RBP5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 WDR1O75083 606 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 KDM4BO94953 1096 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 ANKRD34CP0C6C1 535 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 LINC00271P0C7V0 271 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 IRF2P14316 349 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 GNL1P36915 607 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 USP8P40818 1118 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 PLCD1P51178 756 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 MLLT10P55197 1068 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 ISL1P61371 349 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 BNC1Q01954 994 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 ARHGAP1Q07960 439 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 ILF2Q12905 390 aaKnown RBP5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 TRAF2Q12933 501 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 CA9Q16790 459 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 IFI44LQ53G44 452 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 NDUFAF5Q5TEU4 345 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 LRRC38Q5VT99 294 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 RAD9BQ6WBX8 426 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 FJX1Q86VR8 437 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 AMIGO1Q86WK6 493 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 RBMXL3Q8N7X1 1067 aaKnown RBP5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 NPEPL1Q8NDH3 523 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 ANKRD20A12PQ8NF67 263 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 LILRB1Q8NHL6 650 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 LRRC8CQ8TDW0 803 aa5.21□□□□□ -1.58
HMGB1P51-201ENST00000605166 SLC20A1Q8WUM9 679 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms