RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 B3GNT3Q9Y2A9 372 aa17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 PRRC2CQ9Y520 2896 aaKnown RBP17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 NOTCH2Q04721 2471 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 IQCF5A8MTL0 148 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 PEX12O00623 359 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 PRICKLE3O43900 615 aaPredicted RBP17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 IGHEP01854 428 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 MAGP20916 626 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 ADRA1DP25100 572 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 CSE1LP55060 971 aaKnown RBP17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 SYTL3Q4VX76 610 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 FCRL6Q6DN72 434 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 AFTPHQ6ULP2 937 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 MCATQ8IVS2 390 aaKnown RBP17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 SYCE1Q8N0S2 351 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 CISD2Q8N5K1 135 aaKnown RBP17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 DNAAF3Q8N9W5 541 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 CLEC1AQ8NC01 280 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 NDOR1Q9UHB4 597 aa17.29■□□□□ 0.36
CHMP2A-208ENST00000601220 LIASO43766 372 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 SLCO2B1O94956 709 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 DDAH2O95865 285 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 PTMAP06454 111 aaKnown RBP17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 CD9P21926 228 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 AOAHP28039 575 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 FDFT1P37268 417 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 HSPA14Q0VDF9 509 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 NR6A1Q15406 480 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 Q6ZS92 163 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 COX15Q7KZN9 410 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 KIAA1328Q86T90 577 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 PRUNE1Q86TP1 453 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 IQCKQ8N0W5 287 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 PRR7Q8TB68 274 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 NACC2Q96BF6 587 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 ZNF285Q96NJ3 590 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 IL17FQ96PD4 163 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 NDC1Q9BTX1 674 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 SLC29A3Q9BZD2 475 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 RBSNQ9H1K0 784 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 TXLNGQ9NUQ3 528 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 CIDEBQ9UHD4 219 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 ERRFI1Q9UJM3 462 aaPredicted RBP17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 PIKFYVEQ9Y2I7 2098 aa17.28■□□□□ 0.36
CHMP2A-208ENST00000601220 ESPL1Q14674 2120 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 AGPSO00116 658 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 ETS1P14921 441 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 UNC5DQ6UXZ4 953 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 TTLL10Q6ZVT0 673 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 OVCH1Q7RTY7 1134 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 LDB1Q86U70 411 aaPredicted RBP17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 CUZD1Q86UP6 607 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 C2orf73Q8N5S3 287 aaPredicted RBP17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 OR6P1Q8NGX9 317 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 OR2L8Q8NGY9 312 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 ASZ1Q8WWH4 475 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 PEX13Q92968 403 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 FKBP10Q96AY3 582 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 SPSB2Q99619 263 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 BAG1Q99933 345 aaPredicted RBP17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 DESI2Q9BSY9 194 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 SLC26A1Q9H2B4 701 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 ATP13A2Q9NQ11 1180 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 MARCH4Q9P2E8 410 aaPredicted RBP17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 NTNG1Q9Y2I2 539 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 TCAF1Q9Y4C2 921 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 PCDHGA10Q9Y5H3 936 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 CAPN6Q9Y6Q1 641 aa17.27■□□□□ 0.36
CHMP2A-208ENST00000601220 A0A1B0GX78 115 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 SOCS6O14544 535 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 KDM1AO60341 852 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 S1PR4O95977 384 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 LDLRP01130 860 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 ALPPP05187 535 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 ALAS2P22557 587 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 MMP11P24347 488 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 MCM3P25205 808 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 GRIA3P42263 894 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 ARSFP54793 590 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 KIF5AQ12840 1032 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 NKG7Q16617 165 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 FASTKD1Q53R41 847 aaKnown RBP17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 FIGLAQ6QHK4 219 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 IGFL2Q6UWQ7 119 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 NLRP9Q7RTR0 991 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 DCUN1D3Q8IWE4 304 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 KRT222Q8N1A0 295 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 DLG3Q92796 817 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 TTC1Q99614 292 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 FRMD8P1Q9BZ68 369 aaPredicted RBP17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 P2RY12Q9H244 342 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 WDR54Q9H977 334 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 CHRAC1Q9NRG0 131 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 MAP10Q9P2G4 905 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 DOPEY1Q5JWR5 2465 aa17.26■□□□□ 0.35
CHMP2A-208ENST00000601220 HIVEP3Q5T1R4 2406 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 A1L4Q6 167 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 FITM1A5D6W6 292 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms