RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TSPAN17Q96FV3 270 aa13.29□□□□□ -0.28
VRK3-219ENST00000600137 ZDHHC12Q96GR4 267 aa13.29□□□□□ -0.28
VRK3-219ENST00000600137 SLC41A2Q96JW4 573 aa13.29□□□□□ -0.28
VRK3-219ENST00000600137 DERL2Q9GZP9 239 aa13.29□□□□□ -0.28
VRK3-219ENST00000600137 ZNF768Q9H5H4 540 aaKnown RBP13.29□□□□□ -0.28
VRK3-219ENST00000600137 PARVBQ9HBI1 364 aa13.29□□□□□ -0.28
VRK3-219ENST00000600137 OCIAD1Q9NX40 245 aa13.29□□□□□ -0.28
VRK3-219ENST00000600137 SIDT1Q9NXL6 827 aaKnown RBP13.29□□□□□ -0.28
VRK3-219ENST00000600137 ACTR10Q9NZ32 417 aa13.29□□□□□ -0.28
VRK3-219ENST00000600137 SPATA7Q9P0W8 599 aa13.29□□□□□ -0.28
VRK3-219ENST00000600137 KLHL3Q9UH77 587 aa13.29□□□□□ -0.28
VRK3-219ENST00000600137 IGF2RP11717 2491 aa13.29□□□□□ -0.28
VRK3-219ENST00000600137 SPTBP11277 2137 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 EXOC1LA0A1B0GW35 172 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 PIPSLA2A3N6 862 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 E7ENX8 843 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 PRAMEF10O60809 474 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 INHBAP08476 426 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 CCDC166P0CW27 439 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 FGF3P11487 239 aaPredicted RBP13.28□□□□□ -0.28
VRK3-219ENST00000600137 HGFP14210 728 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 UGT2B7P16662 529 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 IMPA1P29218 277 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 SERPINB9P50453 376 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 TAP2Q03519 686 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 SP140Q13342 867 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 ARHGAP19Q14CB8 494 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 ZIC1Q15915 447 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 CACHD1Q5VU97 1274 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 TTC23LQ6PF05 361 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 IGF2-ASQ6U949 168 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 MBOAT1Q6ZNC8 495 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 FAM20CQ8IXL6 584 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 OR2A1Q8NGT9 310 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 WDR36Q8NI36 951 aaKnown RBP13.28□□□□□ -0.28
VRK3-219ENST00000600137 MAGEC3Q8TD91 643 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 PTERQ96BW5 349 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 GPR78Q96P69 363 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 TRAPPC9Q96Q05 1148 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 CD180Q99467 661 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 UNKQ9C0B0 810 aaKnown RBP13.28□□□□□ -0.28
VRK3-219ENST00000600137 POLR1BQ9H9Y6 1135 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 ASCL3Q9NQ33 180 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 SNX15Q9NRS6 342 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 C1GALT1Q9NS00 363 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 IGSF5Q9NSI5 407 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 NOVA2Q9UNW9 492 aaKnown RBP13.28□□□□□ -0.28
VRK3-219ENST00000600137 SATB2Q9UPW6 733 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 PCDHGA8Q9Y5G5 932 aa13.28□□□□□ -0.28
VRK3-219ENST00000600137 HEATR5BQ9P2D3 2071 aa13.27□□□□□ -0.28
VRK3-219ENST00000600137 TPRP12270 2363 aaKnown RBP13.27□□□□□ -0.29
VRK3-219ENST00000600137 TLCD2A6NGC4 264 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 C2orf74A8MZ97 194 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 AGRPO00253 132 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 MATN2O00339 956 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 RFPL1O75677 317 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 MPOP05164 745 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 ST6GAL1P15907 406 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 NELFEP18615 380 aaKnown RBP13.27□□□□□ -0.29
VRK3-219ENST00000600137 ITIH1P19827 911 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 CRABP2P29373 138 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 SLC26A3P40879 764 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 SLC12A2P55011 1212 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 IRF9Q00978 393 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 EIF3IQ13347 325 aaKnown RBP13.27□□□□□ -0.29
VRK3-219ENST00000600137 KIR2DS3Q14952 304 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 TSNQ15631 228 aaKnown RBP13.27□□□□□ -0.29
VRK3-219ENST00000600137 C3orf38Q5JPI3 329 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 ANKS6Q68DC2 871 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 SPESP1Q6UW49 350 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 TIFABQ6ZNK6 161 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 ISCA2Q86U28 154 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 TRIM73Q86UV7 250 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 CARFQ8N187 725 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 PLD6Q8N2A8 252 aaKnown RBP13.27□□□□□ -0.29
VRK3-219ENST00000600137 FBXO39Q8N4B4 442 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 MREGQ8N565 214 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 MCOLN3Q8TDD5 553 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 PMEPA1Q969W9 287 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 CCDC138Q96M89 665 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 SLC46A1Q96NT5 459 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 STRADBQ9C0K7 418 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 STOX2Q9P2F5 926 aaPredicted RBP13.27□□□□□ -0.29
VRK3-219ENST00000600137 LOXL2Q9Y4K0 774 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 ZFHX4Q86UP3 3567 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 ACACBO00763 2458 aa13.27□□□□□ -0.29
VRK3-219ENST00000600137 GSAPA4D1B5 854 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 NPEPPSL1A6NEC2 478 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 SLC9B1P1A6NJY1 282 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 CDRT15L2A8MXV6 281 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 B4E171 279 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 TRIM49D1C9J1S8 452 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 PLD2O14939 933 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 HCRTR1O43613 425 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 KDM1AO60341 852 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 DXOO77932 396 aaKnown RBP13.26□□□□□ -0.29
VRK3-219ENST00000600137 APC2O95996 2303 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 SNRPAP09012 282 aaKnown RBP13.26□□□□□ -0.29
VRK3-219ENST00000600137 NUDT17P0C025 328 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 PVRP15151 417 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms