RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 RAB11FIP5Q9BXF6 653 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 ACBD3Q9H3P7 528 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 SRMSQ9H3Y6 488 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 EPB41L1Q9H4G0 881 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 XKR8Q9H6D3 395 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 TOR4AQ9NXH8 423 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 KCNK4Q9NYG8 393 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 GRID1Q9ULK0 1009 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 PTPRZ1P23471 2315 aaPredicted RBP12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 A0A1W2PQM1 296 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 OR5K3A6NET4 321 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 UBXN8O00124 270 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 BTN3A3O00478 584 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 TAPBPO15533 448 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 PRPF4O43172 522 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 PRICKLE3O43900 615 aaPredicted RBP12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 SPAG7O75391 227 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 UBXN7O94888 489 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 DKK1O94907 266 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 GUCA1CO95843 209 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 PROS1P07225 676 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 ANXA5P08758 320 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 CD1CP29017 333 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 ALDH4A1P30038 563 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 GGT5P36269 586 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 PLA2G5P39877 138 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 CAPZBP47756 277 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 HNMTP50135 292 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 SLC18A1P54219 525 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 PNLIPRP1P54315 467 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 ILKQ13418 452 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 MPP2Q14168 576 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 FASTKQ14296 549 aaKnown RBP12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 PLCL1Q15111 1095 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 TRIP6Q15654 476 aaKnown RBP12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 CCDC153Q494R4 210 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 ANKS6Q68DC2 871 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 KLHL35Q6PF15 583 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 AGTRAPQ6RW13 159 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 FRA10AC1Q70Z53 315 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 KLHDC8AQ8IYD2 350 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 RAB42Q8N4Z0 105 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 LMNTD1Q8N9Z9 388 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 ATL1Q8WXF7 558 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 RSC1A1Q92681 617 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 RAB33BQ9H082 229 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 C12orf65Q9H3J6 166 aaKnown RBP12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 SLC32A1Q9H598 525 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 CPSF2Q9P2I0 782 aaKnown RBP12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 EPHA6Q9UF33 1036 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 LNPEPQ9UIQ6 1025 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 PTBP2Q9UKA9 531 aaKnown RBP12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 PCDHGA1Q9Y5H4 931 aa12.25□□□□□ -0.45
CHMP2A-206ENST00000600118 A0A1W2PPV9 198 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 OR6C74A6NCV1 312 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 ZNF839A8K0R7 811 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 SUPT3HB4E1H0 165 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 G3V2L1 256 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 NTN3O00634 580 aaPredicted RBP12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 CASC3O15234 703 aaKnown RBP12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 ZW10O43264 779 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 SUPT3HO75486 399 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 CHRM5P08912 532 aaPredicted RBP12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 TYRP1P17643 537 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 PEBP1P30086 187 aaKnown RBP12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 CSF2RBP32927 897 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 ETV4P43268 484 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 SLC6A12P48065 614 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 CCL7P80098 99 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 CFHR1Q03591 330 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 CLPPQ16740 277 aaPredicted RBP12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 SULT1C3Q6IMI6 304 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 TCAIMQ8N3R3 496 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 Q8N9G6 341 aaPredicted RBP12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 OR56A3Q8NH54 315 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 OR10G6Q8NH81 332 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 FLVCR1-AS1Q8TAF5 88 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 TCP10LQ8TDR4 215 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 UBTD2Q8WUN7 234 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 SMPDL3AQ92484 453 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 PIEZO1Q92508 2521 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 EXT2Q93063 718 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 FAM122AQ96E09 287 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 TMEM79Q9BSE2 394 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 SGPP1Q9BX95 441 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 LRRN3Q9H3W5 708 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 HRASLS2Q9NWW9 162 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 SPHK1Q9NYA1 384 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 CD274Q9NZQ7 290 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 SLC17A7Q9P2U7 560 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 TMCO1Q9UM00 188 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 ENTPD2Q9Y5L3 495 aa12.24□□□□□ -0.45
CHMP2A-206ENST00000600118 PABPN1LA6NDY0 278 aaKnown RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 NCF1BA6NI72 391 aaPredicted RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 A8MT66 165 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 NCF1CA8MVU1 366 aaPredicted RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 HMGB1P1B2RPK0 211 aaPredicted RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 STX16-NPEPL1H3BU86 382 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 STX16O14662 325 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 DUX1O43812 170 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms