RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ADAMTS6	Q9UKP5	1117 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	IKZF3	Q9UKT9	509 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	NTN3	O00634	580 aa	Predicted RBP	21.31	■■□□□ 1
LTBP4-227	ENST00000600026	ZW10	O43264	779 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	KDM1A	O60341	852 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	KERA	O60938	352 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	TAC1	P20366	129 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	BDKRB1	P46663	353 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	CLDN6	P56747	220 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	GPLD1	P80108	840 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	PRKG2	Q13237	762 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	PLCL1	Q15111	1095 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	OR4D1	Q15615	310 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	AMZ1	Q400G9	498 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	DCUN1D3	Q8IWE4	304 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	FBXO15	Q8NCQ5	510 aa	Predicted RBP	21.31	■■□□□ 1
LTBP4-227	ENST00000600026	ADAMTS14	Q8WXS8	1223 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	RDH14	Q9HBH5	336 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	NKIRAS1	Q9NYS0	192 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	XPR1	Q9UBH6	696 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	POLG2	Q9UHN1	485 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	OARD1	Q9Y530	152 aa		21.31	■■□□□ 1
LTBP4-227	ENST00000600026	TMEM120B	A0PK00	339 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	PLIN3	O60664	434 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	C1orf105	O95561	183 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	S100B	P04271	92 aa	Predicted RBP	21.3	■■□□□ 1
LTBP4-227	ENST00000600026	RPA3	P35244	121 aa	Predicted RBP	21.3	■■□□□ 1
LTBP4-227	ENST00000600026	SLC18A1	P54219	525 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	PPP2R2A	P63151	447 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	NKAIN2	Q5VXU1	208 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	SBSN	Q6UWP8	590 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	RASGRP3	Q8IV61	690 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	OR52E1	Q8NGJ3	308 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	OR10G6	Q8NH81	332 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	WDR48	Q8TAF3	677 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	EXT2	Q93063	718 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	FAM111A	Q96PZ2	611 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	GFM1	Q96RP9	751 aa	Known RBP	21.3	■■□□□ 1
LTBP4-227	ENST00000600026	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	21.3	■■□□□ 1
LTBP4-227	ENST00000600026	TMCO1	Q9UM00	188 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	PDE10A	Q9Y233	779 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	UNC13C	Q8NB66	2214 aa		21.3	■■□□□ 1
LTBP4-227	ENST00000600026	ARHGEF33	A8MVX0	844 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	SUPT3H	B4E1H0	165 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026		H3BQF6	201 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	DUX1	O43812	170 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	SMIM24	O75264	130 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	SUPT3H	O75486	399 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	PROC	P04070	461 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	PROS1	P07225	676 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	CD1C	P29017	333 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	CSF2RB	P32927	897 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	PPM1F	P49593	454 aa	Predicted RBP	21.29	■■□□□ 1
LTBP4-227	ENST00000600026	AP1S2	P56377	157 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	SPIDR	Q14159	915 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	CDCP2	Q5VXM1	449 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	ANKRD42	Q8N9B4	389 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	RDH11	Q8TC12	318 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	RAD51AP1	Q96B01	352 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	AHCYL2	Q96HN2	611 aa	Known RBP	21.29	■■□□□ 1
LTBP4-227	ENST00000600026	ATOH8	Q96SQ7	321 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	EPB41L1	Q9H4G0	881 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	UTP6	Q9NYH9	597 aa	Known RBP	21.29	■■□□□ 1
LTBP4-227	ENST00000600026	NUDT4	Q9NZJ9	180 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	CD274	Q9NZQ7	290 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	OGFR	Q9NZT2	677 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	CPSF2	Q9P2I0	782 aa	Known RBP	21.29	■■□□□ 1
LTBP4-227	ENST00000600026	SLC17A7	Q9P2U7	560 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	EMCN	Q9ULC0	261 aa		21.29	■■□□□ 1
LTBP4-227	ENST00000600026	TDRKH	Q9Y2W6	561 aa	Known RBP	21.29	■■□□□ 1
LTBP4-227	ENST00000600026	TPR	P12270	2363 aa	Known RBP	21.29	■■□□□ 1
LTBP4-227	ENST00000600026		D6RAR5	112 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	TK2	O00142	265 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	UBXN7	O94888	489 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	TPBGL	P0DKB5	382 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	TYRP1	P17643	537 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	NR1D1	P20393	614 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	CDKL1	Q00532	357 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	GRB7	Q14451	532 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	TGFBI	Q15582	683 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	PHKG1	Q16816	387 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	PPP1R3A	Q16821	1122 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	HES3	Q5TGS1	186 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	RAB44	Q7Z6P3	723 aa	Predicted RBP	21.28	■■□□□ 1
LTBP4-227	ENST00000600026	RAB42	Q8N4Z0	105 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	ARFGAP2	Q8N6H7	521 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	ARMC2	Q8NEN0	867 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	LCN9	Q8WX39	176 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	RSC1A1	Q92681	617 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	DLG3	Q92796	817 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	NRTN	Q99748	197 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	EGFL8	Q99944	293 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	NUDT22	Q9BRQ3	303 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	ZMYND15	Q9H091	742 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	C12orf65	Q9H3J6	166 aa	Known RBP	21.28	■■□□□ 1
LTBP4-227	ENST00000600026	ARL15	Q9NXU5	204 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	PLAGL1	Q9UM63	463 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	ICK	Q9UPZ9	632 aa		21.28	■■□□□ 1
LTBP4-227	ENST00000600026	CPNE6	O95741	557 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	GUCA1C	O95843	209 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms