RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 TMEM102Q8N9M5 508 aaPredicted RBP13.5□□□□□ -0.25
SHKBP1-218ENST00000598907 SIDT2Q8NBJ9 832 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-218ENST00000598907 OR4K2Q8NGD2 314 aa13.5□□□□□ -0.25
SHKBP1-218ENST00000598907 OR13C4Q8NGS5 318 aa13.5□□□□□ -0.25
SHKBP1-218ENST00000598907 DTX3LQ8TDB6 740 aa13.5□□□□□ -0.25
SHKBP1-218ENST00000598907 CDKN2AIPNLQ96HQ2 116 aa13.5□□□□□ -0.25
SHKBP1-218ENST00000598907 DNAJC1Q96KC8 554 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-218ENST00000598907 TTC25Q96NG3 672 aa13.5□□□□□ -0.25
SHKBP1-218ENST00000598907 BARD1Q99728 777 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-218ENST00000598907 C5AR2Q9P296 337 aa13.5□□□□□ -0.25
SHKBP1-218ENST00000598907 GAPDHSO14556 408 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 STX7O15400 261 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 TOX3O15405 576 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 CPNE3O75131 537 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 ERLIN1O75477 346 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 C1QAP02745 245 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 ALPPP05187 535 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 EBLN1P0CF75 366 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 DRD2P14416 443 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 FOLR1P15328 257 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 ARNTP27540 789 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 SSTR1P30872 391 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 HADHAP40939 763 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 RRADP55042 308 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 DCDC1P59894 354 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 XIAPP98170 497 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 GPS2Q13227 327 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 UAP1Q16222 522 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 VWA2Q5GFL6 755 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 BEND6Q5SZJ8 279 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 ADAMTSL4Q6UY14 1074 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 NLRP8Q86W28 1048 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 TRIM48Q8IWZ4 208 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 PALM2Q8IXS6 379 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 GPR26Q8NDV2 337 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 GSDMBQ8TAX9 411 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 GRHL3Q8TE85 626 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 ITLN2Q8WWU7 325 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 ZNF669Q96BR6 464 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 PLEKHG4BQ96PX9 1271 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 OSGEPL1Q9H4B0 414 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 WASH6PQ9NQA3 447 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 MOCS1Q9NZB8 636 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 PKD2L2Q9NZM6 624 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 PKP3Q9Y446 797 aa13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 KLF2Q9Y5W3 355 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-218ENST00000598907 KIR2DS5A0A0G2JLQ3 304 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 A0A0G2JNG1 304 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 A0A1B0GUH1 482 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 CCDC78A2IDD5 438 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 KIR2DS3K7RE56 304 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 RIPK2O43353 540 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 SCRG1O75711 98 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 ABHD2P08910 425 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 NELFEP18615 380 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 TEAD1P28347 426 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 CA5AP35218 305 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 CAPZBP47756 277 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 PPP1CAP62136 330 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 UBE2IP63279 158 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 KIR2DS5Q14953 304 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 ZDHHC20Q5W0Z9 365 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 ZNF449Q6P9G9 518 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 CERS6Q6ZMG9 384 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 C3orf62Q6ZUJ4 267 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 ZNF765Q7L2R6 523 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 TMEM126BQ8IUX1 230 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 ZNF295-AS1Q8N0V1 137 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 ZBTB2Q8N680 514 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 KLHL6Q8WZ60 621 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 SCAMP4Q969E2 229 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 HDAC10Q969S8 669 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 AP2M1Q96CW1 435 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 CFAP36Q96G28 342 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 TRAPPC9Q96Q05 1148 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 AGAP2Q99490 1192 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 BPIFA1Q9NP55 256 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 IL26Q9NPH9 171 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 RAD18Q9NS91 495 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 KCTD5Q9NXV2 234 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 FKBPLQ9UIM3 349 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 TCFL5Q9UL49 500 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 CSAG2Q9Y5P2 127 aa13.48□□□□□ -0.25
SHKBP1-218ENST00000598907 CCDC162PA2VCL2 907 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 AGAP14A8MT82 685 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 VIPP01282 170 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 EDN3P14138 238 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 OTX2P32243 289 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 HSD17B3P37058 310 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 TMPRSS15P98073 1019 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 DPTQ07507 201 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 SEPT7Q16181 437 aaKnown RBP13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 LONRF1Q17RB8 773 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 HENMT1Q5T8I9 393 aaKnown RBP13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 LCN10Q6JVE6 187 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 BNC2Q6ZN30 1099 aaPredicted RBP13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 TMEM26Q6ZUK4 368 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 PHYKPLQ8IUZ5 450 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 ZADH2Q8N4Q0 377 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 CERS2Q96G23 380 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms